Lolium rigidum (rigid ryegrass): 124649925
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Entry
124649925 CDS
T09103
Name
(RefSeq) multisubstrate pseudouridine synthase 7
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124649925
Enzymes [BR:
lrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
124649925
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124649925
Prokaryotic type
124649925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
124649925
NCBI-ProteinID:
XP_047045451
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All DBs
Position
4:complement(237509910..237515915)
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AA seq
703 aa
AA seq
DB search
MARSSSVTEAEVGITCFTSSSLPGFRGVLKHRYSDFIVHEVARDGSVVRLTSLDLPDECV
EPKEEEKAAPSADADHSQALEKFSGLCGEADCSAVRGLIEKAAAGGEADFPPVILSPDAD
KAHRSEVHGFFKNNFKFLVTDTVEHSDGVQKCIRVRVGSEAGGGRGRGGGGGGGRGRGGR
GGGGRGRKRKDMNGSDWGPYDSRGSSNWPAHIGKFLRFNLCKENKDTQDALGVIGKMLGL
QSRAFGFSGTKDKRAVTTQQVTVFKVPANKLAALNKRLYGIKVGNFCYVKEGLGLGQLMG
NRFTITLRGVVAESEDMIKAAVDGLGKNGFINYYGLQRFGSGSVPTHLIGAALLRGEWKT
AVNLVLDPREGERDDIKEVREHYKQHGDIDMALRNFPRHLVAERSILLCLRKSPDNYLQA
LKGIPRTLRMMYVHSYQSYLWNHAASMRVEKYGISQVIEGDLIYSKESRPEEATSVGTSE
ADDGHTNSSDLDISSEILPEENIQSVKIVDSEDLLKGIYSFQDVVLPLPGSQALFPGNEV
AEIYHEIAKKDGISLTESAHGVKEFSITNMKGGYRRVFQKPIDFEWELMTYTDDSASLAE
TDLDLLSKDKLTDAKVAANEPTSTGNSVSKTADCKLEGPLQTSTPTSETRVVENKSIGSS
DTLPSKLAVKLTFTLPASTYATMAIRELLKNSTSVSYQKTLDC
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgctcgagctccgtcaccgaggccgaggtcggcatcacctgcttcacctcctcc
tccctccccgggttccgcggcgtcctcaagcaccgctactccgacttcatcgtccacgag
gtcgcccgggacggctccgtcgtccgcctcacctcgctcgatctccccgacgagtgcgtg
gagcccaaggaggaggagaaggcggcgccgtcggccgacgcggaccactcgcaggctctc
gagaagttcagtgggctctgcggcgaagcggactgcagtgcggtgagggggcttatcgag
aaggctgcggccggcggcgaggctgatttcccgccggttatcctctcgcctgacgccgac
aaagctcatcgatcggaggtgcatggcttcttcaagaataacttcaagttcttggtcaca
gacacagtggaacacagcgacggggtacagaaatgcattagggtgcgtgtggggtctgaa
gctggaggagggcgaggtcgtggtggtggcggtggcggtgggaggggccgtggtgggagg
ggtggtggcgggagaggaaggaagaggaaggacatgaatggctctgattgggggccatac
gacagtagagggtcgtctaattggccagcccatattgggaagttcctgaggtttaacctt
tgcaaagagaacaaggacacacaagatgcattgggtgtgataggaaaaatgttaggactc
cagtcacgcgcatttggcttttcaggaacaaaggataaacgtgctgttaccacgcaacag
gtcactgttttcaaggtaccagctaataaattagctgcactgaataagcgactgtatggc
atcaaagttggaaacttttgttatgtgaaggagggacttggtcttggtcaactcatggga
aatcgatttacaattactctgagaggcgttgttgcagaatctgaagacatgataaaggct
gctgtggatggtttaggaaagaatggatttatcaactactatggtttgcagcgctttgga
agtggttcagtaccaacgcacctcattggagctgctttgcttagaggagaatggaaaact
gctgtgaacttggttcttgatccaagggaaggagagcgtgatgacataaaggaggtgcgt
gaacattacaagcaacatggtgatattgatatggcactgaggaacttccctcgccatctt
gtagctgagaggtctattcttctatgtttgaggaaatcccctgataactatctacaagca
ttaaagggtataccaagaacgttaagaatgatgtatgtacattcttaccaaagttacctt
tggaatcatgctgccagcatgagagttgagaagtatggcatttcacaggttatagaaggt
gatctaatttatagcaaagaaagccgtccagaagaagcaacttccgtaggtacctcagaa
gctgatgatggccatacaaattcgtctgaccttgatatttcttctgaaatacttccagaa
gaaaatatccaatccgtgaagatagtcgattctgaagatttattgaaagggatttactcg
tttcaagatgttgtccttcctttacctggttcacaagcattgttccctgggaatgaagtt
gctgagatttaccatgaaatagctaaaaaggatggcattagcttgacagaaagtgctcat
ggtgtgaaggagttttccattacaaacatgaaaggaggttaccgtcgggtgttccagaag
cctattgattttgagtgggaactgatgacatacacggacgacagtgcatctttagcagaa
actgatctggatcttctgtccaaagacaagcttacagatgcaaaggtagctgcaaatgag
cccacatctactggaaattctgtctccaagactgctgattgcaagttggaagggccattg
cagacctccacgccaactagtgaaactagggtagtagaaaacaagtcgattggcagctca
gatacattgccaagcaaactggctgtgaaattaacatttactttacctgcatcaacctat
gctacaatggcaatcagggaactgctaaagaactcaacctcggtctcgtaccagaaaaca
ctcgattgctaa
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