Lolium rigidum (rigid ryegrass): 124649963
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Entry
124649963 CDS
T09103
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124649963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124649963
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
124649963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
ELL
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
124649963
NCBI-ProteinID:
XP_047045485
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All DBs
Position
4:complement(99589559..99597918)
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AA seq
534 aa
AA seq
DB search
MGSVDLVLKPACEGCGSPSDLYGTGCKHTTLCSSCGKKMALSRARCLVCSAPITNLIREY
NVRANATTDKSFSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQLTDKMLEKYNRKPWI
LEDETGQYQFQGHMEGSQSATATYYLLMLHGKEFHAFPAGNWYNFSKVAQYKQLTLEEAE
EKMNKRKTSATGYERWMMKAATNGPAAFGSDMKKLEPTNDGEKEGARPKKGKDNEDGNNS
DKGEENEEEEAARKDRLGLSKRGMDDDEEGGKDLDFDLDDDIEKGDDWEHEETFTDDDEA
VDIDPEERADLAPEIPAPPEIKQDDDDNEEEEGGLSKSGKELKKLLGRASGQNESDADED
DEDDDQDDESSPVLAPKQKDQPKDEPVDNSPAKPTPSSGHARSTPPASKSKQKRKSGGDD
AKTSGGTASKKVKVESDTKPSGIKEEAPSSSKPTSKATASSKTASANVSPVTEDEIRTVL
LAVAPVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVLREDKK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgtagacctggtgctgaagccggcgtgcgagggctgcggctccccatcggac
ctctacggcaccgggtgcaagcacaccacgctctgcagctcatgcggcaagaaaatggcg
ctctcccgcgctcgatgcctcgtctgctccgctcccatcaccaacctaatccgggaatac
aatgtacgggcaaatgctaccacagataagtcattctctattggaagatttgtcactggt
ttaccacctttctcaaagaaaaagaatgctgagaacaaatggtctctccataaagaaggg
ctacaagggcgacagcttactgataaaatgctggagaaatacaacaggaagccatggatt
ttggaagatgaaactggtcagtatcagtttcaaggtcatatggagggatcacagtcagca
acagctacatactatttattgatgttgcatggcaaggaattccatgcatttcctgctggc
aactggtataacttcagtaaagttgcacagtacaaacaactgactctggaagaggctgag
gagaagatgaataagagaaagactagtgcaactggttatgaacgttggatgatgaaggca
gctacgaatggcccagctgcctttggttctgatatgaaaaaacttgagcctactaatgat
ggagaaaaagaaggtgctcgtcctaagaagggaaaagacaatgaggacggtaataattct
gataaaggtgaggagaatgaagaagaggaagctgctcgcaaagataggcttgggctctct
aagaggggcatggatgacgacgaggaaggtggaaaagatttagattttgatttggatgat
gacattgagaaaggggatgactgggagcatgaagaaacattcactgatgatgatgaggct
gtggatatcgacccagaggagcgggcagatttagctcctgaaattcctgctccacctgaa
attaagcaggatgatgatgacaatgaagaagaagaaggtggtttgagcaagtcaggaaag
gaattaaagaagttgcttgggcgtgcttctggacaaaatgagtcagacgccgatgaggat
gatgaagacgatgatcaggacgatgagtcatccccagtgcttgctcctaagcagaaggat
caaccgaaagatgaacctgttgacaacagcccagctaaacccacaccttcatcaggacat
gcccgtagcacgcctcctgcatcaaaatccaaacaaaagaggaaatcgggtggtgatgat
gcaaaaacatctggcggtacagcttcaaagaaagtaaaggtggaatctgacaccaaacca
tcaggcatcaaggaggaggcaccatcttcctcgaaacctacatcaaaggccacggcttcc
tcaaaaactgccagtgccaatgtatctcctgtgacagaggatgagatcaggactgttctt
cttgcagtggctccagtcactacacaagatttagtatccagatttaagtctagactacga
ggtccagaggacaagaatgcatttgctgaaattctgaagaaaatttcgaagatacagaaa
acgaatggccacaactatgtcgtccttagagaggataagaaatga
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