Lolium rigidum (rigid ryegrass): 124650139
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Entry
124650139 CDS
T09103
Name
(RefSeq) soluble starch synthase 2-1, chloroplastic/amyloplastic-like isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00500
Starch and sucrose metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124650139
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lrd01003
]
124650139
Enzymes [BR:
lrd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
124650139
Glycosyltransferases [BR:
lrd01003
]
Polysaccharide
Storage polysaccharide
124650139
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glyco_trans_1_4
Glycos_transf_1
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
124650139
NCBI-ProteinID:
XP_047045651
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Position
4:103178294..103187864
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AA seq
774 aa
AA seq
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MAASSSPLLAPPPAALLRHAASPRPPAGGAPAAASASPSSSSSCRCYGYSPAPSGGFLLQ
PPARFPRRRPALYTAAARTASKVRFCGNGVYGRPAVLRGWSKWWPEKGLCAAGTGDDAGD
QVGDQDDDGVRVSNDALRATIRKSREVLAMHRDLLQQLSEKKKLISIIEASSIQNGQEAS
SGSSFSLPDPVSEGQEIGYDLQMYLDRRSQKSQVRSTHAESISGQHEYYGSLEGKVSNSD
VNGSPVKDYMAQQSQISEERHSVTEGINDNSSSSASVDIMNIILVAAECAPWSKTGGLGD
VAGALPKALSKRGHRVMAVVPMYGKYEEPQQIGESKRYQVAGQDMEVKYHHAYIDGVDFV
FVDNPLFHNVESEIYGGNRTVSNDILKRMVLLCKAAVEAPWCVPCGGFCYGDGNLVFIAN
DWHTALLPVYLKAYYHDNGFMIYARSVLVIHNIAHQGRGPLDDFSYLDLPSNYMDLFKHY
DPFGGDHLNIFAAGIKAADRLLTVSHGYAWELKTPEGGWGLHGIISESDWKFQGIVNGID
TADWNPKSDVHLKSDGYANYSLETVQTGKAQCKAALQKELGLPVRGDVPVIAFIGRLDNQ
KGVDLIAEAMPWIAGQDVQVILLGTGRQDLEDTLRRLESQHYDRVRGWVGFSVRLAHRMT
AGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVQQYNPYEEVGLGWTFENAE
ANRLIDALGHCLNTYRNYKSSWEGLQRRGMMQDLSWDTAAKCYEEVLVAAKYQW
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcctcctctcccctcctcgccccaccgcccgcggcgctgctccgccacgcc
gcttctccccgtcctcccgctggcggtgcccccgccgcggcctccgcctccccctcctct
tcctcctcctgccgctgctacggatattctcccgctccgagcggcggttttctcctacaa
ccgcctgctcgattcccccgccgccgcccagcattgtacacagcggccgcccgtactgct
tccaaggtgaggttttgcgggaatggcgtctacggccggccggcggtgctcaggggttgg
agtaaatggtggccggagaagggtttatgtgccgctgggacgggtgacgatgccggggat
caagttggcgatcaggacgacgatggagtccgtgtttctaacgacgccctccgcgccacc
atccgtaagagcagagaggtgctggcgatgcacagggatctacttcagcagctatcagaa
aagaagaagctcatctctattattgaagccagttccattcaaaatgggcaagaggcgtcc
agtggcagttccttttcactcccggatccagtttcagagggccaagagattggctatgac
cttcagatgtaccttgacaggcgttcacagaaatcacaagtccgttcaactcatgcagaa
tctattagtggacagcatgaatactatggaagtttagaaggcaaagtttctaactctgat
gttaatggatcacctgtcaaggattacatggcccaacagagtcaaataagtgaagaaaga
cactcggttactgagggaataaatgacaactcatcctcttcggccagcgtagatattatg
aatatcatattggtagctgcggaatgtgctccttggtcaaaaacaggtggacttggtgac
gttgccggagctttgccaaaggctttgtccaagagaggtcatcgtgtcatggcagtagta
ccaatgtatggaaagtatgaagaacctcaacaaataggagaatcaaagaggtaccaggtc
gcagggcaggatatggaggtaaaatatcatcatgcatacatagatggcgtcgattttgta
ttcgttgacaatcctttattccacaatgttgagagtgaaatttatggcggaaaccgaaca
gtaagtaatgatatcttgaaacggatggttttgctgtgcaaagctgctgtagaggctcca
tggtgtgttccatgtggtggtttttgctacggtgatggaaatcttgtgttcattgcaaat
gattggcacactgcattactgcctgtttatttgaaggcttattatcatgataatggtttc
atgatatatgcccgttctgtccttgtgatacacaatatagcacatcagggtcgtggcccc
ttggatgatttcagttacctggatttgcccagtaactacatggaccttttcaaacattat
gatccattcgggggtgatcatctaaacatttttgcagctggaattaaagctgccgatcgt
ttacttactgttagccatggctatgcatgggagctcaaaacacctgaaggtggttggggc
cttcatgggatcatcagtgaaagtgattggaaattccaaggcattgtaaatggtattgat
accgcggattggaaccctaagtctgatgtccacctaaaatctgatggatacgccaactac
tctctagaaactgttcaaacaggtaaagcgcaatgtaaggcggcattgcagaaagaactt
ggcctcccggttcgtggtgatgttcccgtcattgctttcatcgggcggttagacaatcaa
aaaggtgtagacctgattgcagaagcaatgccatggatagctggtcaagatgtacaggta
atactcctgggtactggaaggcaggaccttgaagatacattgaggaggcttgaaagtcag
cattacgacagagtcagggggtgggttggtttctctgtcaggttggctcaccgtatgact
gcaggcgctgatatactattgatgccatcaaggtttgagccatgtgggttgaaccagctc
tatgcaatgatgtatggcactgtccccgtagtgcatgcagtcggtggtcttcgagacacc
gtccagcaatataatccttatgaggaggttggacttggttggacttttgaaaatgcggag
gcaaacagattgattgatgcgctggggcactgcctgaatacatacagaaactacaagtcc
agttgggagggactccaaaggagagggatgatgcaagatttaagttgggacactgctgct
aaatgctatgaggaggttcttgttgctgccaagtatcagtggtga
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