Lolium rigidum (rigid ryegrass): 124650251
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Entry
124650251 CDS
T09103
Name
(RefSeq) protein OPAQUE1-like isoform X1
KO
K10357
myosin V
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124650251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124650251
04131 Membrane trafficking [BR:
lrd04131
]
124650251
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124650251
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrd04812
]
124650251
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124650251
mRNA cycle factors
P-body specific factors
124650251
Membrane trafficking [BR:
lrd04131
]
Others
Actin-binding proteins
Myosins
124650251
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
124650251
Cytoskeleton proteins [BR:
lrd04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
124650251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
Zeta_toxin
AAA_22
AAA_lid_6
Motif
Other DBs
NCBI-GeneID:
124650251
NCBI-ProteinID:
XP_047045751
LinkDB
All DBs
Position
4:complement(105552723..105609447)
Genome browser
AA seq
1530 aa
AA seq
DB search
MIFCPGTAVWVEHPELAWAEAEVVSLSSPSFIMVVLSSGVKAVVDGRKVLPRNTEADLVG
VDDMTKLVYLHEPGVLCNLARRYTLNEIYTYTGHILIAVNPFAKLPHLYDMHMMEQYKGV
QFGELSPHVFAIADASYRAMVSEGHSQSILVSGESGAGKTETTKLIMRYLTFVGGRATGD
IRSVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDKSGRISGAAVRTYLLERSR
VVQISKSERNYHCFYQLCASEQVAGKYKLAHPKNFNYLNQSHTYELQGVSDADEYLKTRR
AMDIVGICFADQEAIFRTVAAILHLGNIEFSPGKEFDSSAVKDAKSKFHLHMASDLLMVD
GSLLLSTLCYRTIKTPEGNIIKAVDSSAAVVGRDTLAKTVYARLFDWLVDNINKSIGQDM
ESRAQIGVLDIYGFESFTYNSFEQLCINFANEKLQQHFNKHVFKMEQEEYKTEEISWSYI
EFVDNQDILDLIEKKPIGIISLLDEACMLGKSTHETFAMKLFQNFRAHPRLEKPKLSKTD
FCLSHFAGKVLYQTDLFLDKNRDYVIAEHQNLLCSSKCSFISGLFAWHQDDPSKSSYKFS
SVASRFKQQLQALMETLSSTEPHYVRCVKPNSRNYPQKFENVSVLQQLRSGGVLEAIRIS
LAGYPTRRTYAEFIDRFGLLVPEHLMARVDEKSLTERILKKLSLENFQLGRTKVFLRAGQ
IAVLDSKRTEILEKASRIIQGCFRTFTARNKFLSTRKASMSLQAYCRGCLARNVLEAKRQ
VAAAVSVEKYARRWFCRCAYWHLRSAAIVIQSGVRYMLAVQSLLNLKKDEAATIIQAWWR
MQKIHNFHKHYRHATILIQCCWRQKLAKRALRNLKQAAYETGALRDAKGKLERSLEDLTL
RFTLERRQRLAAEEARELEVSKVLKILESLKSELEATAEEKKKSYKTIASLQHNLDLLTK
DQEALHNSLTQIEEVKRENISLKAKNIELEQELLKAQECSHDNMDKLNGVEKNYVHLRDN
LKSLEDKISNLEDENHVLRQKALSLSPRHTRTGSLPFGASPSCPKSFFESSSMKLAPLPH
NLTELRRSRMSTDRHEEYHELLQHCIKGDMGFKKGKPVAACIIYRCLLHWGVFETERTTI
FDFIIQTINTILKTENENDIFPYWLANASALLCQLQRNVRSKGFILAPSRSSSDPRSCEK
ANDAVRSPLKVLGQRENMSHIDARYPAMLFKQQLTASLEKIFGLIRDNLKKEISPLLSLC
IQAPKLARGGSGRRSSSPDVTLQQPISAHWDRIVKFLDSLMDRLHKNFVPSFFIRKLVTQ
VFSFINVQLFNSLLLRRECCTFSNGEYVKSGLCVLEKWIVDTTEEHAGAAWDELKFIRQA
VDFLIIPQKSKRTLEKIKKNICPVSDSNIICSSTLGQYNFTQCSSALSVRQIYRLCTMYW
DDKYGTHSVSSEVVAQMRDMVSNDAQNPVSNSFLLDDDLSIPFTTEDIAEEVPIIGMSNI
EMPSSLRHVHSAQFLTQTFMSHCTRLDETA
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atgattttctgtcccggcaccgccgtgtgggtggaacacccggaactcgcctgggctgag
gccgaggtcgtgtccctctcatccccgtccttcatcatggtcgttctatctagcggcgtc
aaggccgtggtcgatgggaggaaggtgctgcctaggaacacggaggccgacctcgtgggc
gtcgacgatatgaccaagctggtctatctccacgagcctggggtgctctgcaaccttgcg
cgacggtacacactcaatgagatctatacatacacaggacatatcttaatcgcagtaaat
cccttcgccaagctgcctcatctctatgatatgcatatgatggagcaatacaaaggtgtg
cagtttggcgagttaagtccacatgtttttgcaattgctgatgcatcatacagagctatg
gtcagcgagggccacagccagtccatattagtcagtggagaaagtggcgctggaaaaaca
gaaaccaccaagcttattatgcgatatcttacttttgttggggggcgtgcaaccggtgat
atccgttctgtggagcaacaagttttagaatcaaatccattgttggaggcctttggtaat
gcacgaacggtgagaaatgataactccagtcgctttgggaaatttgttgagattcagttt
gacaaatcaggtagaatatcaggggctgcagttcgaacttatctcctggagaggtctcgc
gttgtacaaatatctaaatctgaaaggaattaccactgtttttaccaactttgtgcatct
gagcaggttgcgggtaaatacaagcttgctcaccctaagaactttaactacttaaatcaa
agccatacatatgagttgcagggggtcagcgatgcagacgaatatttgaaaacacggaga
gcaatggatattgttggtatatgttttgcagatcaggaagccatattccgaactgtagct
gccatccttcatctaggaaatattgaattttctcctgggaaagagtttgattcatctgct
gtcaaggatgcaaagtctaaattccatcttcatatggcttctgatttgctcatggttgat
ggaagccttttgctttcaacactgtgctatcgcacgatcaaaactcctgaaggaaacata
attaaggcagtcgacagctctgcagctgtagtcggtcgtgatactttggcgaagactgtt
tatgctcgattatttgattggcttgtcgacaacattaataagtccattgggcaggacatg
gagtcgagggcgcaaattggggtattggacatctatggttttgagagcttcacatacaac
agctttgagcagttgtgtatcaattttgccaatgaaaagctccaacagcattttaacaag
catgttttcaagatggagcaggaggaatacaaaactgaagaaatcagctggagctacatt
gaatttgttgataaccaagatatattggatctcattgaaaagaaaccaatcggcataatt
tcacttttggatgaagcatgcatgcttggaaaatcaacacatgagacttttgcaatgaag
ttatttcagaattttagagcacatccaagactggaaaagccaaagctctcgaagacagat
ttttgcctctctcattttgctggaaaggtgttataccaaactgatttatttttggacaag
aaccgagattacgtaattgcagagcatcagaatcttctttgctcttcaaaatgctcattc
atctctgggctctttgcttggcaccaagacgatccatcaaaatcgtcgtataagttttct
tctgtagcttctcggttcaagcaacaacttcaagcacttatggaaacacttagctcaaca
gaacctcattacgtccgctgtgtaaaaccaaattctcgaaactatccacagaaatttgaa
aatgttagcgtactacagcaactgcgtagcgggggtgttcttgaggctattaggataagt
cttgctggttatcctacaaggagaacatatgctgaattcattgatcgctttggacttctt
gtgccagaacatctgatggcacgggttgatgagaaatcgctgactgagagaatcctaaag
aaattaagtcttgagaactttcaacttggcaggacaaaagtgtttctccgtgctggccag
attgctgtgttggactccaaacgtactgagattctggagaaggcttcaagaatcattcag
ggctgttttagaacctttacagctcgcaacaaatttctttcaactaggaaagcttctatg
tcgcttcaagcatactgtcgaggttgtttagcacgaaatgtgctggaagcgaagagacaa
gttgcagcagctgtttcagtagaaaaatatgctcgaagatggttctgtcgttgtgcatat
tggcatctacgttctgcagctattgtcatccagtctggtgttcgatatatgctagcagtt
cagagcttgcttaacttgaagaaggatgaagccgctactattatccaggcttggtggaga
atgcagaagatccacaatttccataagcactaccgacatgcaacaatcctcatccagtgt
tgttggagacagaagctcgctaaaagggcattgcggaaccttaaacaggctgcttatgag
actggagctttacgtgatgcaaaaggcaaactcgagaggagcttagaagaccttactttg
agattcaccttggagaggagacaaaggcttgctgctgaagaggcaagggaactagaggtc
tcgaaggttcttaaaatcttggaatcattaaaatccgagttagaggctacggctgaagaa
aagaaaaaaagttacaagacaattgcctcactccaacataacttagacttgttgaccaag
gatcaagaagcacttcataatagccttactcagatagaggaagtaaagagggagaatatt
tcattaaaggcaaagaatatagaactagagcaagagctcttgaaggctcaagaatgcagc
catgataatatggacaagttgaatggtgtagaaaaaaactacgtgcatctccgggataac
ttaaaaagcttggaagataagatttcgaatttggaagatgagaaccatgtactgaggcag
aaggccttaagcctatctcctaggcacactcgcactgggagtcttccttttggagcttcc
ccttcctgcccaaagtcattctttgaatcatcatcgatgaaacttgcacctctccctcat
aacctaacagaattgagaagatcaaggatgagtaccgacaggcacgaggagtaccatgaa
ttgcttcagcactgcattaaaggcgacatggggttcaagaagggcaaaccagttgcagcc
tgtatcatttacagatgccttctccattggggagtatttgagactgaaagaacaacaatt
tttgacttcataattcagacaatcaataccattttgaagacagaaaatgagaatgacatt
tttccgtactggttagccaatgcttctgctcttctatgccagttgcaaagaaacgtgagg
tcaaaaggattcatcttggcaccttctcgatcttcttcagatccccgttcatgtgaaaag
gcaaatgatgcagtcagatctcctttgaaagtgcttgggcaacgggagaacatgtcacac
attgatgctcgatacccagctatgctatttaagcaacaactaactgcttccctggagaaa
atatttgggttaattcgtgacaatctgaagaaagagatatcacctctcttaagcctttgc
atccaggcaccaaaacttgctcgtggtggcagtggaagaaggtccagttcacctgacgtg
accttgcagcagccaataagtgcgcattgggataggattgtcaaatttctggattcactg
atggacaggctacataaaaactttgtaccttcgtttttcatccgcaagctagtaactcaa
gttttctcgttcataaatgtacagctgtttaatagtttgctccttcgacgggagtgttgc
acattttcaaatggagaatatgtgaaatctgggctttgtgtactggagaaatggatcgtc
gatactacagaagagcatgcaggtgcagcttgggatgagctcaaattcatcagacaagcg
gttgattttctgattattcctcagaaaagcaagaggactcttgagaaaattaagaagaat
atttgcccggtatcggacagtaatataatttgctcgagtactcttgggcaatataatttt
actcagtgtagttctgcgttaagcgtaaggcagatatatcgtctgtgtactatgtactgg
gatgacaaatatggtacacatagtgtatcatcagaggttgttgcccaaatgagggacatg
gtgagcaatgatgcacaaaatcctgtgtcgaattcatttcttttagatgacgacttgagc
attcctttcacgacagaagatatagcagaggaagtaccaatcatcggcatgtcaaacatt
gaaatgccctcttcgcttcgccatgttcactccgctcagttcttaacacaaaccttcatg
agtcactgcactcgcctagatgaaactgcctag
DBGET
integrated database retrieval system
