Lolium rigidum (rigid ryegrass): 124650270
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Entry
124650270 CDS
T09103
Name
(RefSeq) protein starmaker-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124650270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124650270
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124650270
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124650270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-C3HC4_3
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
124650270
NCBI-ProteinID:
XP_047045770
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Position
4:69802974..69807863
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AA seq
598 aa
AA seq
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MTKESSEPDGEDEVQDELDELLEQSRQMDQESSESNGDDEEEDELDEQEGQMDQESSESE
GEDEEEDEVDGQEGQMDQESSKSGGEDDEQDEEGDQERQMDQESSESDGEVEERDGEDDQ
ERQMDQESSESNGEDEDQDEEDDQERQMDQVSSESDGEYEERDGEDDQERQTDQESSESD
DEVGEEDEEDEQERQIDQESSESDGEDEEQDEVDEEVEQEMQIDQELSESEQAHSESQSI
QAPVESAGSEEEDEQIEQEMHIDQAYSEFDGEDEEQYVEEHLGEEESQNNQESVGGDEEG
QEEEDEQVEDVLDGGCVHKNSSEPVLAPPPSKHTAIANMTLDEDMLDCGVCFLPLKPPIF
QCDVGHVVCSSCRYKLATFGRCHVCSTAITGGYRRCHALEQLVESIRGSCPNATYGCAAR
VPYYDLHAHLLDFPHAPCHCPREACGFVGSTSALLDHFVGTHKWPCITGVRNSENRAIHL
HDGFNFMAVVHDTREYLFLLRVTRSPFGRVISSVCLHPQAAADGSRSKNVKCRLQLIYLR
DIFDDSDVLSHVQDSSFKVTCTDLSSGMPNLCFQFIVPYEVQPEAAATVEVKVSFTIR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagagagctccgagcctgatggtgaagatgaggtgcaggacgaactggacgag
ctgctcgagcagtcaaggcaaatggatcaggagagctcagaatctaatggtgacgacgag
gaggaggacgaactggacgagcaggaagggcaaatggatcaagagagctcagaatctgag
ggtgaagatgaggaggaggacgaagtggacgggcaggaagggcaaatggatcaagagagc
tcaaaatctggtggtgaagacgatgagcaggacgaagagggcgaccaggaaagacaaatg
gatcaagagagctcagaatctgatggtgaagttgaggagcgggacggagaggacgaccag
gaaaggcaaatggatcaagagagctcagaatctaacggtgaagacgaggatcaagacgaa
gaggacgaccaagaaaggcaaatggatcaagtgagctcagaatctgacggcgaatatgag
gagcgggacggagaggatgaccaggaaaggcaaacagatcaagagagctcagaatctgat
gatgaagttggggaggaggacgaagaggatgagcaggaaaggcaaattgaccaagagagc
tcagaatctgatggtgaagacgaggagcaggacgaagtggacgaggaggtagaacaggaa
atgcaaattgatcaagagctctcagaatctgaacaagcacactcggaaagccaaagcatt
caagctcctgtggagtctgctggtagcgaagaagaggacgagcagatagagcaggaaatg
catatcgatcaagcatactcggaatttgatggtgaagacgaggaacagtacgtagaagaa
cacctgggggaggaggaaagccaaaacaatcaagaatctgtaggtggggatgaggaggga
caggaagaagaggacgagcaggtggaggatgttttagacgggggatgtgttcacaaaaac
tcctctgagccggtattggcaccaccaccgtccaagcatacagcgatagcgaacatgacg
ttggacgaggacatgctcgattgcggtgtttgtttcctacccctcaagccaccaatcttc
cagtgtgatgtcggccacgtggtgtgctcgtcgtgtcggtacaagctggccacgtttggg
aggtgccatgtgtgtagcaccgccattaccggtggctaccgccggtgccatgccttggag
cagctggtggagtccatccgggggtcatgccccaatgcaacctatggctgcgctgccagg
gtgccctactatgacctccatgctcaccttctggatttcccacacgctccgtgccactgc
cctagagaagcatgtggcttcgttggctcgacatcggcgctccttgatcacttcgtcggc
acacacaagtggccatgcatcaccggggttcggaacagcgagaatcgtgccatccacctc
catgatggcttcaacttcatggctgtcgtccatgacaccagagagtacctattcctgtta
agggtgacgcgctcaccatttggccgcgtgatatcgtccgtgtgcttacaccctcaagcc
gcagccgatggttctcggtcaaagaatgtgaagtgcaggctccagctcatctacttgcgc
gacatcttcgatgactctgacgtgctgtcccatgtccaggattcttctttcaaagtgaca
tgcactgatctctccagtgggatgcccaacctctgcttccagttcatcgtgccctatgag
gttcaaccagaagctgcggctactgtcgaagtcaaagtatctttcaccatccggtag
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