Lolium rigidum (rigid ryegrass): 124650352
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Entry
124650352 CDS
T09103
Name
(RefSeq) histone acetyltransferase GCN5 isoform X1
KO
K06062
histone acetyltransferase [EC:
2.3.1.48
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124650352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124650352
03036 Chromosome and associated proteins [BR:
lrd03036
]
124650352
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
124650352
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124650352
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
124650352
HAT complexes
PCAF complex
124650352
STAGA complex
124650352
TFTC complex
124650352
SAGA complex
124650352
SLIK complex
124650352
ADA-HAT complex
124650352
HAT-A2 complex
124650352
ATAC complex
124650352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
Acetyltransf_1
Acetyltransf_7
Acetyltransf_10
FR47
Motif
Other DBs
NCBI-GeneID:
124650352
NCBI-ProteinID:
XP_047045841
LinkDB
All DBs
Position
4:108442760..108449947
Genome browser
AA seq
509 aa
AA seq
DB search
MDGLAAPSPSHSGATSGGGASNRKRKLPPPSLSDATADEDDDTTAPSSPATSPSSPSRPS
SPSSSHSDEDDDDSLTTFTAARLDAAPTSSSGRPPKPDSSSASAVTASAVAPKNDAASAA
AGDGDEDSKGLFTDNIQTSGAYSAREEGLKREEDTGKLKFLCYSNDGVDEHMIWLVGLKN
IFARQLPNMPKEYIVRLVMDRTHKSMMVIRNNNVVGGITYRPYASQRFGEIAFCAITADE
QVKGYGTRLMNHLKQHARDADGLTHFLTYADNNAVGYFVKQGFTKEITFDKERWQGYIKD
YDGGILMECRIDQKLPYVDLATMIRRQRQAIDEKIRELSNCHIVYSGIDFQKKEAGIPRR
LMKPEDIPGLREAGWTPDQWGHSKSRSSFSSDYNTYRQQLTGLMRLLLKSLIDHTDAWPF
KEPVDSRDVPDYYDIIKDPIDLKTMSRRVESEQYYVTIEMFVADLKRMFVNARTYNSPDT
IYFKCSTRLEAYFTNRIQAHLAQAASAKN
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggacggcctcgcggcgccctcgccttcccattccggcgccacctccggaggcggcgct
tccaaccgcaagcggaagcttccgccgccgtccctctccgacgccaccgccgacgaggac
gacgacaccaccgcgccgtcgtcccccgcaacctccccatcttcgccttcccgcccgtca
tctccgtcctcctctcactcagacgaagatgacgacgactcccttaccaccttcaccgct
gcccgcctcgacgccgcgccgacctcctcctccggcaggccccccaagcccgattcctcg
tccgcatctgccgtcacagcgtctgcggtggctcccaagaacgacgctgcgtctgctgcg
gcaggcgacggagatgaggactccaaggggctcttcacggacaatatacagaccagcggc
gcctacagcgcccgcgaggagggcctcaagcgcgaggaagatacagggaagctgaaattt
ctgtgctattctaatgatggagttgatgaacatatgatttggttggtaggtttgaagaat
atctttgcgcggcagctccctaatatgcctaaagagtatattgtccgacttgttatggat
agaactcacaagtcaatgatggttatcaggaataataatgttgtaggaggcattacttac
cgcccttatgcaagccagaggtttggtgaaatagcattctgtgccattacagccgatgag
caagttaaaggctatggaacaaggttaatgaatcatctgaagcaacatgctcgagatgct
gacggtctcactcatttcttgacttatgcagataacaatgccgttggctattttgtaaag
cagggtttcacaaaggagatcacttttgacaaagaaagatggcaagggtacatcaaagac
tatgatggaggaatattgatggagtgcagaattgatcaaaagttgccatatgttgatctg
gcaacgatgattcggcgtcaaagacaggcaattgatgagaagatcagagagctttctaac
tgccatattgtttattcaggaattgattttcaaaagaaagaagctggtattccaagaaga
ctgatgaaaccagaagatatccctggtttgagggaagctggatggactcctgatcagtgg
gggcattccaaatcacgttcgtcattttcctcggattacaacacgtacagacagcagctt
actggcctcatgcggttgttgttgaagagtttgatcgatcatactgatgcctggccgttc
aaagagccggtggattcccgtgatgttccagactattacgatattatcaaagaccctatt
gatttgaaaacgatgtcgagaagggtcgagtcggagcagtactatgttaccatagagatg
tttgtagccgacttgaaaagaatgtttgtcaatgcaagaacctacaactctcctgataca
atctattttaaatgctccactcggttagaggcctacttcacaaacagaatccaggctcac
cttgcccaggctgcctcagcgaagaactag
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