Lolium rigidum (rigid ryegrass): 124650599
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Entry
124650599 CDS
T09103
Name
(RefSeq) threonine--tRNA ligase, mitochondrial 1-like
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124650599
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lrd01007
]
124650599
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124650599
Enzymes [BR:
lrd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
124650599
Amino acid related enzymes [BR:
lrd01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
124650599
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124650599
Prokaryotic type
124650599
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
124650599
NCBI-ProteinID:
XP_047046070
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Position
4:complement(273004124..273011162)
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AA seq
624 aa
AA seq
DB search
MSTPMDIAKEILSSKLAASCLIAQVNGEPWDMTRPLEDNCELRLLDFDTVEGCATFWRSS
ALILGEALESLYGCKLCSLSPCTTNAEGFYCDAYYNDITLNESDFGRIQDKARKVVAAKQ
PFERIVVSRAEALKCFAENKFKVEIISELPDEAITLYRCGSLVDLCPGPHIPNTSFVKAF
TCLKASASYWRGKANRESLQRVHGISFPDSERLKEYEARIEAAEERNHRILGESQKLFFF
SPLSPGSPNFLPHGIKIKNKLFSFLRQEYRDRGYQEVESPNVYNMEIWEKSGHAMNYKEN
MFTFEIDKREFGLKPMNCPGHCIIFKHGTHSYRELPLRIAEFGVLHRNEASGALTGLTRV
RRFQQDDAHIFCRESQIKEEVKSVLEFIKYVYDKFGFNHDYELELSTRPEKYLGDIETWN
KAEQQLREALLEFGKPFEINEGDGAFYGPKIDVGVFDALKRKHQCATIQLDFQLPICFDL
TYSTEEGTEKPVMIHRAILGSFERMFAILLEHYNGKWPLWLSPRQAIVCSISPKSVEYAK
QVHAKIYKAGFDVEIDTSDKKIDKKVAEAQTQGAQFNYILVVGEREAKSETVSVRLRGSR
EPERSPMSIDNVIARFRDEVAAYR
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccccgatggacattgctaaggagatactatcaagcaagctagcggctagctgt
ttgattgctcaagtgaatggagaaccctgggatatgacaaggccactcgaagataactgt
gaactcaggttgctcgacttcgacaccgtggaagggtgtgccaccttttggcgctcgagt
gctcttattcttggagaagctctggagagtttgtacggctgcaaactgtgtagtctctcg
ccttgtactacaaatgcggaaggtttctactgtgatgcctactacaatgatatcactctg
aacgagtcggatttcggtcgcatccaagataaagctcgaaaagtggtcgccgcgaagcag
ccatttgaacgtattgtagtctccagggccgaagctctgaaatgcttcgctgaaaacaaa
tttaaggttgaaatcattagtgagttgcctgacgaagccattacattatatagatgtggt
tctttagttgacctgtgccctggaccacacatcccgaatacttcctttgtgaaagctttt
acttgcctcaaggcttcagcttcatattggagaggaaaagcaaaccgcgagagcctgcag
agagtacatggaatttctttccctgattctgaacgtcttaaggaatatgaagctaggata
gaggctgccgaggagcgcaatcataggatattgggggagtcccagaaactcttctttttc
agtccacttagtccaggaagtcccaacttccttccacatggtattaaaattaaaaacaaa
ttgttcagtttcttgcgacaagaatacagggacagaggctaccaagaggttgagagtcca
aatgtttacaacatggagatttgggaaaaatctgggcatgctatgaactacaaggagaac
atgtttacttttgagatcgacaaaagggagtttggtcttaagccaatgaattgtcctggg
cattgcataatatttaagcacgggactcattcttacagagagttgccactgcgcattgct
gaatttggcgttcttcacagaaatgaggctagtggtgcacttacaggtttgacacgcgtt
agaagattccaacaggatgatgcacatattttttgtagagagagccaaatcaaggaagaa
gttaagagcgttttggaatttattaagtatgtctacgacaaattcgggtttaaccatgat
tatgaattggagttatcaacgagacctgagaagtatttaggtgacattgaaacctggaac
aaagcagagcaacaacttagagaagccttgcttgagtttgggaagccatttgagattaat
gaaggagatggtgctttctatggcccaaaaatcgatgttggtgtgtttgatgccctcaaa
aggaaacatcagtgtgcgacaattcagctggactttcagctgcctatttgcttcgatctt
acttactctacagaggaaggaaccgaaaagcctgtgatgatacatagggcaatcctagga
agttttgaaaggatgtttgctattcttttggagcattacaatggtaaatggccgttgtgg
ctaagccctcgtcaagccattgtttgctctatatcgcccaaatcagtagaatatgcaaag
caggttcatgctaagatatataaagctggttttgatgttgaaatcgacacaagtgacaaa
aaaattgacaaaaaggttgctgaagctcaaactcaaggcgcccagtttaactatattctt
gtcgtaggtgaaagagaggcaaaatctgaaacggtcagcgtgaggctaagaggcagccgc
gaacccgaacgatctccaatgagcattgacaacgtcatcgcacgttttagggatgaagtg
gcagcttacagatag
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