Lolium rigidum (rigid ryegrass): 124650626
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Entry
124650626 CDS
T09103
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124650626
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124650626
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124650626
NCBI-ProteinID:
XP_047046097
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Position
4:complement(116235678..116239404)
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AA seq
394 aa
AA seq
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MQEAGGGCMTGNPIDDCWRCAGTNWWEDRQRLADCGIGFGRNALGGKGGPYYVVTDPSDR
DPVNPSPGTLRHAAIQEGPLWITFARDMTIRLNEELLVNSYKTLDGRGASVHVAGGACIT
LQYVSNVIIHNLHVHDCVPAGNANVRSSPTHAGWRTRSDGDGISLFSARDVWVDHCALWR
CADGLVDAIMGTTAVTVSNSYFAHHDEVMLLGHSDGYAPDSGMQVTVAFNHFGLGLVQRM
PRCRRGYFHIVNNDYTAWQMYAIGGSASPTINSQGNRYIAPANPNAKEVTKRVDTEEGQW
DGWNWRSEGDMMVNGAFFVPSGEGLEAIYDKASSVDPKSAALVDQLTMGAGVLGGPRYVR
FTFSLAGTLSFFIHPPSTEIQYLVLPVRQNRNRC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggcaggcggcgggtgcatgacgggtaacccaatcgacgactgctggcggtgc
gcggggacaaactggtgggaggaccgccagcgtctagcggactgcggcatcgggttcggg
cgcaacgcgctgggcggcaagggcgggccgtactacgtggtgacggacccgtcggaccgg
gacccggtgaacccgtccccggggacgctccggcacgccgcgatccaggaaggcccgctg
tggatcacgttcgcccgcgacatgaccatccgcctgaacgaggagctgctggtgaacagc
tacaagacgctggacgggcgcggcgcgagcgtgcacgtcgccggcggcgcgtgcatcacg
ctgcagtacgtgtccaacgtgatcatccacaacctgcacgtgcacgactgcgtgccggcc
gggaacgcgaacgtgcggtcgtcgccgacgcacgccgggtggcggacgcggtcggacggc
gacggcatctcgctgttctcggcccgggacgtgtgggtggaccactgcgcgctgtggcgg
tgcgcggacgggctggtggacgccatcatgggcacgacggcggtgacggtgtccaacagc
tacttcgcccaccacgacgaggtgatgctgctggggcacagcgacgggtacgcgccggac
tccgggatgcaggtcacggtggcgttcaaccacttcggcctcgggctggtccagcggatg
ccgcggtgtcggaggggctacttccacatcgtcaacaacgactacacggcgtggcagatg
tacgccatcggcggcagcgcctcgcccaccatcaacagccaggggaaccgctacatcgcc
cccgccaacccaaacgcaaaggaggtgacgaagcgtgtggacacagaggaggggcagtgg
gacgggtggaactggcggtcggagggggacatgatggtcaacggcgccttcttcgtgccc
tccggcgaaggcctcgaggccatctacgacaaggcctccagcgtcgacccaaagtcggcg
gcgctcgtcgaccagctcaccatgggcgccggcgtcctcggcggacccaggtacgtacgc
ttcaccttctcactcgccggcacgctttctttctttattcatccgccgtctactgaaata
cagtatctcgtactaccagtgcgtcaaaaccgcaatcgctgctga
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