Lolium rigidum (rigid ryegrass): 124651064
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Entry
124651064 CDS
T09103
Name
(RefSeq) ATPase family AAA domain-containing protein At1g05910 isoform X1
KO
K22531
ATPase family AAA domain-containing protein 2 [EC:3.6.1.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124651064
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AAA
Bromodomain
AAA_lid_3
IstB_IS21
AAA_16
nSTAND3
AAA_5
AAA_2
AAA_18
AAA_22
TIP49
AAA_30
RNA_helicase
AAA_14
Mg_chelatase
AAA_7
Sigma54_activ_2
AAA_25
AAA_33
NPHP3_N
ABC_tran
PhoH
AAA_28
Parvo_NS1
RuvB_N
TTC3_9th
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
124651064
NCBI-ProteinID:
XP_047046170
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Position
5:complement(252650749..252656662)
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AA seq
1205 aa
AA seq
DB search
MAGMDGKGDGQVAPVRSSDRLRQRPKYYGRGYLYYSPNMRNKMNNKKRAPASQIAKKMLR
KPAARDPPADSVAANLRRSTRKRRVSVTLDGYGTDSSSMEDDDLMRPRYRSSKSKVDSQA
SERPKRKKMSNSNSMPRREGLRPRRSLRGQRHLPFEDSDDDQESSEEQHAQDQRENGNDI
EEDDANEEEVDGGDEAEEDEDDEDGEEEPEGRKKYDLRDRAEVRRPSPRKEVKHRPQSPR
RALVHGAGPKNSKYLKKSGSRMHKRPRYSMPDDSDDSLLVDEPDEGPSMPWMRSGRGGMP
WLLGGMDMHSSAAWGLNAGASGWGHQGDTGVSTSSLMPGAQTAGPSSKGGADIQPLQIDE
SVSFSDIGGLSEYIDALKEMVFFPLLYPDFFANYHITPPRGVLLCGPPGTGKTLIARALA
CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPAIIFFDEIDGLAPVRS
SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFYFPLPGY
DARAEILDIHTRKWKEPPPKELKMELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTS
DDKFVIDVDSVRVQKNHFLEAMSTITPAAHRGSIVHSRPLSPVIAPCLKRHLEKIMKRIS
DVFPYLSSSDVSKYAALSYGSSISLVYRPRLLICGVEGVGLDHVGPAVLHELEKFSVHSL
GLPSLLSDPSAKTPEEALVHIFGEARRTTPSILYLPQFHLWWDTAHEQLRAVLLTLLNEL
ASNLPVLLLGTSSVAFDDLEEECASIFSSRNVYQVERPGDDDRLRYFTVLFDSLLSLQIE
DSRSKSKDQKSSVDLPKAPKKVDGPKVSELKAKAEAEQHAVRRMRMCLRDICNRILYNKR
FNAFHFPVSEEEVPDYRAIIHNPMDMAAVLQRVDSGEYFTRAAFMKDIDLIVSNAKTYNG
EDYNGSRIVSRACELRDVVQGMLSQMDPSLVSFCDKIAAQGGPLQFMDGEDSSILQAPPV
VQLVSVTRTSARLRNVQPDVDLSRSYEVLKRHKKSTENEQVTIVSGSTIKESTATDERSP
GDVDLSKPTSPEEAPEGPVSNGPLKEADKAPAEVPAVPGSPPEPMVTDNVEEATMPTSDD
TPEQLEAVKQRFMELTVGYGVPQLERLYSRIMKGALELRGKETNEDHRRLVVRHLLAFVE
NGDNF
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatggatgggaagggtgacggccaggtggcgcccgtgaggagcagcgaccgg
ctgcggcagcggcccaagtactacgggcgggggtatctctactactcgcccaacatgcgc
aacaagatgaacaacaagaagcgggcgcctgcgtcccagatcgccaagaagatgcttcgc
aagccggctgcgcgggatcctccggctgattctgttgcagcaaatctgcgccgttcaacg
cgaaagcgaagagtgtctgtaactctggatggctacggcacagatagttccagtatggaa
gatgatgatcttatgagacccagataccggtcttcaaagagtaaagtggacagtcaagca
tcggaacggcctaaacgcaagaaaatgtctaactctaactccatgccccgccgtgaaggt
ttaaggcctagaagatctctgcggggacaaaggcatcttccattcgaagattctgatgat
gaccaggaaagttctgaagaacaacatgcgcaagatcagagagaaaatggtaatgatatt
gaagaggatgatgccaatgaagaggaggttgatggaggtgacgaagctgaagaagatgaa
gatgatgaagacggcgaggaagagccagaaggaaggaaaaaatatgatctaagggatcgt
gcagaagttcgtagaccttccccacggaaggaagtgaagcacagaccacaatctccccgc
agagcacttgtacatggcgctggtccaaagaacagcaagtatttgaaaaaaagtgggtca
cgcatgcacaagcgccctcgttattcaatgccagatgattcagatgattctctccttgtg
gacgagccagatgaaggtccatccatgccatggatgcgtagtgggagaggaggtatgcca
tggcttttgggtggaatggatatgcatagttcggcagcatggggtctcaatgctggagcg
tctggatggggtcatcagggtgacactggagtcagtacttcatcacttatgccaggggcg
caaactgctggaccaagctccaagggaggagctgatattcagcctctgcagattgacgag
agtgtgagttttagtgatataggggggttatctgagtacattgatgccttaaaggaaatg
gttttcttccctctgctgtatccagatttttttgctaactatcacatcactcctcctaga
ggagttcttctctgtggccctcctggtacagggaagacattgattgcacgtgccctagct
tgtgctgcctctaaagctggtcagaaggtcagcttttatatgcgaaaaggagctgatgtt
cttagtaaatgggttggagaggctgaaaggcagctcaagttgctttttgaggaagctcaa
aaaaatcagccggcaataatttttttcgacgaaatagatggccttgcccctgtgagatct
agtaagcaagagcagattcacaattcaattgtctcaacattgcttgcattgatggatggt
cttgattcacgtgggcaagttgttttgatcggagcaaccaatcgaattgatgccattgat
ggggcattgcgcagacctggccgatttgaccgtgagttttatttccctttacctggctat
gatgcacgggctgaaatactggatattcatacacggaaatggaaggagcccccaccaaag
gagctaaagatggagcttgccgcaagctgtgtcggatattgtggggctgatttgaaagca
ttatgtacagaagctgctattcgagcatttagagagaagtatcctcaggtttacacaagt
gatgacaagtttgtcattgatgttgactcggtgagggttcagaaaaaccacttcttggaa
gctatgtctacaataactccagctgcgcataggggatcgattgtgcattcaaggccactg
tcaccagttattgctccatgtttgaagaggcatctggagaaaataatgaaacgtatttct
gatgtttttccttacctttcatcgtcagatgttagcaaatacgctgccctttcatacgga
tcttccatctctcttgtttataggcctcgccttttgatatgtggcgttgagggtgttggg
ctggatcatgttgggccagctgttctgcatgagcttgagaaattttctgttcactccttg
gggttgccatctcttctctccgatccaagtgcaaagacacctgaagaagctcttgtgcat
atttttggggaagcaaggagaacaacaccatccatactctacttgcctcagtttcatctt
tggtgggatacggcacatgaacagctcagggctgtattattgactctgctgaatgagttg
gcatccaaccttccagttttgttgctaggaacttcatcagtggcctttgatgacctcgaa
gaggagtgtgcttccatattttcttctcgtaatgtgtatcaagtggaacgaccaggtgat
gatgacagattaagatacttcactgtactgtttgattcattgctctcacttcaaatcgaa
gattcaagaagcaagtcgaaagaccagaagtcttctgtcgatcttccaaaagcaccaaag
aaagtagatggccctaaggtttccgagttgaaagctaaggcagaagctgagcaacacgct
gttcgtcggatgagaatgtgtctccgagatatttgtaacaggattttgtataacaaaagg
ttcaatgcattccacttcccagtatcagaagaggaagtaccggactatcgagcaataatt
cacaaccccatggatatggctgctgtcttgcagcgggtggactctggagagtacttcact
cgggcagcattcatgaaggatattgatcttatagtctcaaatgcaaagacttacaatggc
gaggattacaatggatctaggatcgtcagtagagcatgtgaactccgagatgtggtgcaa
ggtatgctgtcacagatggacccatctttggtgtccttttgtgataaaattgctgcacag
gggggaccactgcagtttatggatggtgaggatagctccattctccaagcgcctcctgtt
gttcagttagtttctgttactagaacaagcgcgaggcttcgtaatgtacagccagatgtt
gatctgtcacgaagttatgaggtgctaaagcggcacaagaaaagcactgaaaacgaacaa
gtgaccattgtttcaggctcgactatcaaagagtcgacagcaacagatgaaaggtctcct
ggcgatgtggatttgtcaaagccaacttccccggaagaagctccagaaggaccagtttca
aatggccctctaaaagaagctgacaaggcaccagctgaagtacccgcagtacctggttct
cctcctgaacccatggtcactgataatgtcgaagaggccaccatgcctaccagcgatgac
acgcctgaacagctggaagctgtgaaacagcgcttcatggaactcaccgtaggctacggg
gtgccgcagctcgagaggctctactcccggataatgaaaggtgcattagagttgagaggt
aaagaaaccaatgaggaccacagacggttagttgttaggcatttgttggcatttgttgag
aacggtgacaatttttaa
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