Lolium rigidum (rigid ryegrass): 124651129
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Entry
124651129 CDS
T09103
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog
KO
K20307
trafficking protein particle complex subunit 10
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124651129
Membrane trafficking [BR:
lrd04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
124651129
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
124651129
NCBI-ProteinID:
XP_047046223
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Position
5:complement(65434633..65444451)
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AA seq
1245 aa
AA seq
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MANYLAQFQTIKSSCDRIVIAVEDVSDLWLNVKESFQQRLPVKKACLNNKARNPVLVENL
PAEFIQTTDSRLRSRFPQEQYLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDER
EWFIVFVSKAHPSNEQANKMAKKVYARLEADFNTKKRERCCKFDLHGPDADFWDDFDSKM
VDCIRNTLDRRVQFYEEENRRLSEQRFTPIWNFCNFFILKESMAFMFEVTNLHEDSLREY
DELELCYSESVNLPGKPREFGGLDTGDDQAALLNPGFKALTQIVQDDVFREFEFRQYIFA
CQSKLLFKLSRPVEVAARGYAFVVNFSKTLAWHENVLPFCFREVWVITACLGLINSTSSQ
YDGGAVAIDSEKEFYRLQGDLYSLCRVKFMRLAYLIGYGVEIEKSPVNSASLSMLSWPKP
ATWPSIPPDSSAEIMTKEKTILQAKPREKLFDIQRKPLPLEPSFLLREANRRRAFLSVGN
ISELYDSVDGSGADAHSKLSPNKSSSNLMTRTMSGPATSETSLPVDRPMRLSEIHVAAEY
ALKQTISDPDFMTSLSSPEEFENRYMELTKGAADNYHRSWWKRHGVVLDGEIAAIYFKHG
NYDLAAKSYEKVCALYSAEGWEELLADVLPDLAECQKILNDEAGYLASCVKLLSLESSLF
SSKERQAFQSEVVRLAHSEMTHPVPLDVSSLITFAGTPAPPLELCDGDPGTLSVAVWSGF
PHDITLESLSLRLSASSSADEGLKAIKSAGARVLVPGRNIITFDIPPQKPGSYVLGALTG
QIGKLSFRSHGFAQDGPVDTDEFMSFEKPTRPVLKVRKPRALVDITPAVSSALLMNELQW
IGLIVKPIDYSLKGGILHIDAGAELKIEESQMIEIESYRSEGGHACPTDASGATSTSTDT
GRVEKVPIENGKIKLPDWASDVTTLVWFPVRAIDDTIAKGTSPASPQKHSIVDGMRMIAL
KLEFGAFHNQVFERTIAVHFTNPFHVSTRVVDKCNDGTLLLQVILHSEVKATLHVKDVSL
DLQAGFEHLGKDGRPTSSLFPLVIAPSSRAGILFVIRLSGTKDLDELEKADSMLNIKYGI
SGDRTTGAHSPVPVKPDDSEELLLFKISLKLKRPVLDPCLAVGFLPFSTDYLRVGQLVNM
KWRVERLKDLEEASLSGDGILYQVDANPQNWMVAGRKCGHISFSEAQGSRIEIAVTCVPL
VSGYVHPPQLGLPDVGDANISCNPAGPHLVCVLPPTLSTSYCIPA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactacctggcgcagttccagaccatcaagtcctcctgcgaccgcatcgtcatc
gccgttgaggatgtcagtgacttgtggctcaacgtcaaagagagttttcagcaacgcttg
cctgtcaagaaagcctgcctcaataacaaggcgaggaaccctgttttagtggaaaaccta
ccagctgaatttatacagactactgactcaaggctgcggagtcgatttccacaagaacaa
tacttgttttggttccgtgagccatatgctacggttgttcttgttacttgcgaggatctt
gacgagttcaaaaccattcttaagcctcgcctcaagttaattgtgcaaaatgatgagaga
gaatggttcattgtatttgtgtccaaggcccatcctagcaacgagcaagcaaataagatg
gcaaagaaagtatatgccaggcttgaggctgatttcaacactaaaaagcgagaaagatgc
tgcaaatttgatcttcatggacctgatgctgatttctgggatgatttcgactcaaaaatg
gtggactgcataaggaatacattggatagaagggttcagttttatgaagaagaaaaccgc
aggttaagtgagcaaagattcactccaatatggaacttctgtaacttctttattctgaag
gaaagtatggcatttatgtttgaagtgactaatcttcatgaagattcactccgtgaatat
gatgagcttgaactatgctactcagaatcagtaaatctcccagggaaacctcgagaattt
ggaggattggatactggtgatgatcaggctgctctgctaaatccagggttcaaagcgttg
acccaaattgttcaggatgacgtgttcagggaatttgagtttaggcaatacatatttgct
tgccagtctaagttattatttaaactgtctcgaccggttgaggttgctgcaagaggatat
gcttttgttgtcaacttttccaagacgctagcctggcatgaaaatgttcttccattttgc
ttccgtgaagtatgggtgataacagcatgtttgggtttaataaactctacgagttcacag
tatgatggtggagctgttgctattgactcggagaaggagttctaccgtctccagggcgac
ctttattctctctgtcgtgttaagtttatgaggcttgcttatttaattggctatggggtt
gagatagaaaagagtccagtcaacagtgcatctttaagcatgctatcttggcccaagcca
gctacttggccttcaatcccacctgattcatcggcagagataatgacaaaggagaagaca
atacttcaagcaaaaccaagagaaaagctctttgacattcagaggaaaccattgccatta
gaaccttcttttctgctgcgtgaggctaataggcgtagagcttttctttcggttggaaat
atttctgaattatatgattcagttgatggttcaggtgcagatgcacattcaaaactttct
cccaacaaatcttcttctaacctgatgacaagaacgatgtccggaccagcaacctctgag
acttctttaccagttgataggcccatgaggctgtcagaaattcatgttgcagctgagtat
gcattgaaacagacgatatctgatcctgattttatgacatcactttcgtcaccagaagaa
tttgagaatagatatatggagctcactaaaggtgctgctgacaattatcaccgctcttgg
tggaaaaggcatggagttgtgcttgatggagagattgcagctatatattttaagcatgga
aattatgacctggctgcaaaatcctatgagaaagtttgtgctctctactctgcagaaggc
tgggaagagctattggcagacgttcttcctgatcttgcagaatgccagaagattcttaat
gacgaagctggttatcttgcttcctgtgtaaagttactttctctagagagtagcttgttt
tcgtctaaagagcggcaagctttccagtcagaggttgttcggcttgctcacagtgaaatg
acacatcccgtgccccttgatgtttcatcactaattacattcgctggaactcctgctccg
ccactagaactatgtgatggagatcctggtacactatctgtagcagtttggagtggcttc
ccacatgacatcacactcgaatctctcagtctaagattatcagcttcctctagtgcagat
gaaggtcttaaggcgataaagagtgcaggcgcacgtgttcttgtgccaggtagaaatatt
atcaccttcgacattcctcctcaaaagcctggttcctacgtgttgggtgctctcactggg
cagattggcaagctatcattcagatcgcatggatttgctcaagacggtccagtggacact
gatgaattcatgagctttgagaagccaacaagacctgttttgaaggtgagaaaaccaagg
gctctggttgatattactcctgctgtgtcctctgcgttacttatgaatgaactccagtgg
atcgggttgattgtcaagcctatagactattctttgaaaggtggaatattgcatatagat
gctggtgctgaactgaaaattgaggagtcacagatgattgagatagaaagttacagaagc
gagggcgggcatgcttgtcctactgatgcttctggtgcaacatcaacctccactgatact
ggaagggttgagaaggtcccaatcgaaaatgggaagataaaactgccagattgggctagt
gatgtgactacccttgtttggtttcctgttcgtgctatagacgataccattgcgaaggga
acatctccagcatcccctcagaaacatagcatagtagatggaatgagaatgattgctctc
aagcttgaatttggagctttccataatcaagtatttgaaaggaccattgcagtacatttc
actaatccgttccatgtgagcacgcgtgttgttgacaagtgcaacgatggaaccctactt
ctgcaggtgatattacattctgaagtgaaggctactctgcatgtaaaggatgtatcatta
gacctacaagctggatttgagcacttaggcaaggatggacggccgacgtcaagcttgttc
cctctggttattgctccttcttccagagctggaatcttatttgtaatacgtttaagtggc
acaaaagacctggatgagctggaaaaggctgacagcatgttgaatattaagtacgggata
tctggtgacagaacaactggagcacactctccagttcctgttaaacctgatgattctgaa
gagcttcttctattcaagatttcactcaaactgaagcgccctgttctggatccatgtctg
gcagttggattccttccattttctacggactacctgagggttggtcaattagtcaacatg
aaatggagggttgaaaggctgaaggacctggaggaggcatctctgtctggcgatggaata
ctttatcaggtcgatgctaatccacaaaactggatggttgctgggaggaaatgcggtcac
atttcattctcagaagcacaagggtcaaggattgagatcgccgtgacatgcgtcccgctg
gtgtctgggtacgtgcacccgccacagctagggttgcccgacgtaggcgatgccaacatc
agctgtaatccagcaggcccccacctggtgtgcgtcctccctcccacccttagcacctcg
tactgtataccagcctga
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