KEGG   Lolium rigidum (rigid ryegrass): 124651452
Entry
124651452         CDS       T09103                                 
Name
(RefSeq) splicing factor U2af small subunit A-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124651452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124651452
Spliceosome [BR:lrd03041]
 Complex A
  U2 snRNP components
   U2 related factors
    124651452
 Complex B
    124651452
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4
Other DBs
NCBI-GeneID: 124651452
NCBI-ProteinID: XP_047046497
LinkDB
Position
5:complement(229776748..229778074)
AA seq 290 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPSVSPTLLLCNMYQRPDMITP
GFDPQGNPIDPSKIQGDFEDFYEDIFDELSKYGEVENLHVCDNLADHLIGNVYVSFREED
QAAKALQALQGRFYSGRPIIAEFSPVTDFREATCRQFEEHNCNRGGYCNFMHVKEIGRDL
RKRLYGHLHRSRRSHSRSPSPYHYHSRDRDRSSRSSRDRGDYYGGSLDRGDYGDYHHHSR
RSSERNRNYDSDGSRRRRHRSRSRSPVREGSEERRAKIEQWNREREAAQA
NT seq 873 nt   +upstreamnt  +downstreamnt
atggctgagcacctggcgtcgatcttcggcacggagaaggaccgcgtgaactgccccttc
tacttcaagatcggcgcgtgcaggcacggcgaccgctgctcccgcctgcacaaccgcccc
tccgtgtcgccgacgctgctgctgtgcaacatgtaccagcgccccgacatgatcaccccg
ggtttcgacccgcagggcaaccccatcgaccccagcaagatccagggcgactttgaggac
ttctacgaggacatcttcgacgagctcagcaagtacggcgaggtggagaacctgcacgtc
tgcgacaacctcgccgaccacctcattggcaacgtgtacgtctcgttcagggaggaggac
caggctgccaaggccctccaggcgctgcaggggcggttctactctggccgccccatcatc
gctgagttctcgccggtcaccgacttccgggaggccacctgcaggcagttcgaggagcac
aactgcaaccgtggagggtactgcaacttcatgcatgtgaaggagatcggcagggacctg
aggaagaggctgtatgggcacctgcataggtccaggagaagccacagcaggagcccaagc
ccttaccattaccactcgagggaccgtgatcgatcctcgcggtcgtccagggaccgcgga
gactactatggtggcagcttggaccgtggtgactatggtgattaccaccaccatagcagg
aggagcagtgagaggaatcgcaactatgacagtgatgggagcaggcgtcggcggcacagg
agccgcagtaggagcccggtcagggagggcagcgaggagaggagggcgaaaattgaacag
tggaaccgcgaaagggaggcggctcaggcctga

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