Lolium rigidum (rigid ryegrass): 124651699
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Entry
124651699 CDS
T09103
Name
(RefSeq) clathrin heavy chain 1-like isoform X1
KO
K04646
clathrin heavy chain
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04142
Lysosome
lrd04144
Endocytosis
lrd05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124651699
04142 Lysosome
124651699
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124651699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124651699
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124651699
Membrane trafficking [BR:
lrd04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124651699
Exosome [BR:
lrd04147
]
Exosomal proteins
Proteins found in most exosomes
124651699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
124651699
NCBI-ProteinID:
XP_047046698
LinkDB
All DBs
Position
5:136498966..136510390
Genome browser
AA seq
1739 aa
AA seq
DB search
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESERYICVRETSPQNSVVIIDMAMPSQ
PLRRPITADSALMNPNTRILALKAQIAGTTQDHLQIFNIEAKTKVKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVPGNENPSTLICFASKASNAGTITS
KLHIIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQISQKYGLVYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTAESSTTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPLDYNTITDLFLQRNMIREATAFLLDVLKPNLEEHAFLQTKVLE
INLVTYPNVADAILANGMFTHYDRPRIAQLCEKAGLYLRALQHYAELPDIKRVIVNTHAI
EPQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIVVQVILPSFILTFLSRCSFFFSILI
IRKPVARLQAAKEYAEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPEIHFKYIESA
ARTGQIKEVERVTRESNFYDAEKTKNFLMETKLPDARPLINVCDRFGFVPDLTHYLYTNN
MLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRL
RLLTQFLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPFYDSRVVGKYCEKRDPT
LAVVAYRRGQCDEELINVTNKNSLFKLQARYVVERMDGDLWDKVLQPENEYRRQFIDQVV
STALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKA
DSSRVMDYVNRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIRSIERA
EEFAFRVEEDAVWSQVAKAQLREGLVSEAIESFIRADDVTHFLDVIRAAEEANVYHDLVK
YLLMVRQKAREPKVDGELIFAYAKTDRLSDIEEFILMPNVANLQNVGDRLFDEELYEAAK
IIYAFISNWAKLAVTLVRLKQFQSAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLN
IIVQVDDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEH
IKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPDAWEHMQFKDVC
VKIANVEIYYKAVHFYLQEHPDLINDLLNVLALRLDHTRVVDIMRKAGQLHLVKPYMVAV
QSNNVSAVNEALNELYVEEEDYERLRESVDMHDNFDQIGLAQKLEKHELLEMRRIAAYIY
KKAGRWKQSIALSKKDNMYKDCMETCSQSGDRELSEDLLVYFIEQGKKECFASCLFICYD
LIRADVALELAWTNNMLDFAFPYLLQFIREYTSKVDDLVKDRIESQKEEKAKESEEKELV
AQQNMYAQLLPLALPAPPGMMGGPPPMGGMGMPPMGGMGMPPMGPGPMPAYGMPPMGSY
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctcaccagcctgggg
atcgcgccgcagttcgtcaccttcacccacgtcaccatggagtcggagcggtacatctgc
gtccgggagacctcgccgcagaacagcgtcgtcatcatcgacatggccatgcccagccag
cccctccgcaggcccatcaccgccgactcggcgctcatgaaccccaacaccaggatcctg
gccctcaaagctcaaatagctggaaccacacaggatcacttgcaaatatttaatattgag
gctaagactaaagttaagtcacaccagatgcctgaacaggttgtgttttggaaatggatc
acaccaaagttgttgggtttggttacacagacatctgtttatcactggtcaattgaagga
gattctgagccagttaagatgtttgataggacagctaatttggccaataatcagattatc
aactatcgatgtgatccagcggagaagtggcttgtgcttattggaattgcacctggtgct
ccagagaggccgcagctggtgaagggaaatatgcaacttttttctgtggatcagcagcgt
agccaagcacttgaagcccatgctgcttcttttgcaacattcaaggttcctggcaacgag
aacccatccaccctcatctgttttgcttcgaaggcatctaatgctggaacaattacttcg
aagctacatattattgaactgggtgcccagccagggaaacctggcttttccaagaagcaa
gccgatctcttcttcccaccagatttccaggatgattttcctgtagcaatgcagatctct
caaaagtatggccttgtctatgtaatcacgaagcttgggcttttgtttgtgtatgacttg
gaaactgctagcgcagtttataggaatagaatcagcccagatcccatattcttgactgca
gagtcttctactactggtggattttatgctattaacagaagagggcaggttttgcatgcc
actgttaatgatgcaaccgttgtaccatttgtcagcggtcaattaaacaaccttgaacta
gccgtgaatcttgccaaaagagccaatctccctggggcagagaacttggttgtgcaaaga
ttccaggaactgtttgcgcagacaaaatacaaggaagcagcagagctggctgcagaatct
cctcagggtcttctgaggactcctgagactgttgccaaattccagagtgttcctgttcaa
gctgggcaaacacctccactcttgcagtactttggcacactgcttactcgagggaaactg
aatgcctatgaatctctcgaattatctcgccttgttgtcaatcagaacaagaagaacctt
ttggaaaattggttggcagaagacaagttagagtgcagcgaagaacttggagatcttgtc
aagacggtagacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaa
gtcgtcgccgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcag
gtcggatacactcctgactacctcttcctccttcagaccatcttacgtacagacccacag
ggagctgtcaactttgctctcatgatgtcacaaatggagggtggttgtccgctagattat
aatacaataactgatctcttccttcagagaaatatgatacgtgaagcaacagcttttctg
ttggatgtactgaaaccaaatttggaagagcatgctttccttcaaaccaaggttttggag
atcaacttggtgacctacccaaatgttgctgatgccattcttgctaatggtatgttcact
cattacgaccggcctcgtattgctcagctgtgtgaaaaagctggcttgtacttgcgggcc
ctccagcactacgcagagttacctgatatcaagcgtgttattgtgaatacacatgctatt
gagccacaggcacttgttgagttctttggaaccctttctaaagaatgggcattagaatgc
atgaaggaccttctactggtcaacttgagaggaaatcttcaaattgttgtgcaggtaatc
ctaccgagtttcattttaacttttctttcccgttgctctttttttttctctattctaatt
atcagaaaacctgtggcacgtctgcaggctgccaaagaatacgctgagcagcttggagtt
gacgcctgcataaaactatttgaacaatttaaatcatatgaaggcctctacttcttctta
ggatcctatttgagctcaagtgaggatcctgaaattcatttcaaatacatagaatcagct
gcaaggactggacagattaaagaagttgagcgagttaccagagagtctaacttttatgat
gctgagaagacgaagaacttcttgatggaaacaaaattacctgatgcccgcccactcata
aatgtttgcgaccgctttggttttgttccagatcttactcactatctctatacaaataat
atgctccggtatatcgaaggctatgtacagaaagtgaaccctggaaatgctccattggta
gtagggcagctacttgatgatgagtgcccagaagatttcatcaagggtttgatcttgtcg
gtccgttctcttctccctgttgagccactggttgatgaatgcgagaagaggaatcgacta
cggttacttacacaattcctggagcacttggtgagcgagggtagtcaagatgtgcatgtc
cacaatgctcttggaaaaattatcattgatagcaacaacaatcctgagcatttcctgact
accaacccgttctatgactcccgtgtggtgggtaaatactgtgaaaagagggatcctacg
ctagccgttgttgcttacagacgtggacagtgcgatgaagaacttatcaacgttaccaac
aaaaattcgttgttcaagctgcaagctaggtatgtggttgaaagaatggatggcgatctg
tgggataaagttctacagcctgaaaatgaatatagaaggcaattcattgaccaagtggtg
tctaccgcattgccagaaagcaagagtcctgaacaagtttctgctgctgttaaggctttc
atgacagctgacctccctcatgaactgatagaacttcttgaaaagattgtccttcagaac
tctgcgttcagtggaaactttaatcttcagaatctgctcatcttgacagccatcaaggcg
gactcatctagagtcatggactatgttaacagacttgataactttgatggtcctgctgtc
ggagaagtggctgttgaagcacaactctatgaggaggcctttgccatattcaagaagttc
aacttgaatgtgcaggctgtcaatgttctgttggataacatccgaagcattgaaagagct
gaagagttcgctttccgtgttgaagaagatgctgtttggagccaggttgccaaggcccag
ctgcgtgaaggtctagttagcgaagcaatcgaatcattcatccgtgcagatgacgtgaca
cacttccttgatgtcattcgtgctgctgaggaagcaaatgtttaccatgatttagttaag
tacttgctgatggtaaggcaaaaggcaagggagcccaaagttgatggtgaactcatcttc
gcatatgctaagactgataggctcagtgacattgaagagttcattctgatgccaaatgtc
gcgaatctccaaaatgttggtgaccgtttgtttgacgaagagctttacgaagccgcaaag
atcatctatgccttcatctcaaactgggccaagctggctgtcaccctggtcaggctgaag
cagttccaaagtgctgtagatgctgcccgtaaagctaacagtgctaaaacatggaaggaa
gtctgctttgcttgtgttgatgctgaggagttccgtctagcacaaatctgtggcctcaat
attatcgtccaggttgatgacttggaggaagtcagcgaatactaccagaacagagggtgc
ttcaatgagcttatttcccttatggagagtggtcttggacttgaacgggcacatatgggc
atctttacagaactgggagttctctatgctagataccgccctgaaaagctcatggaacac
atcaaactgttctccacccgtctcaacattcctaagcttatccgtgcttgtgatgaacag
cagcactggaaagagcttacatacctatacatccaatatgatgaatttgacaatgctgcc
acaactatcatgaaccactcaccagatgcgtgggaacatatgcaatttaaggatgtttgt
gtgaagattgcaaacgttgagatatattacaaggcagtgcacttctatttgcaagaacac
cctgatctcatcaacgatcttctcaatgtgcttgcgcttcgtttggatcatacaagagtt
gtagacataatgcgcaaggctggtcagttgcatcttgtgaaaccgtacatggttgcagtt
cagagtaacaatgtctctgccgtcaatgaggctttgaatgagctatatgtcgaagaggag
gactacgagaggctccgtgaatctgtggacatgcatgataactttgatcagattggtctt
gcccagaagcttgagaagcatgaattgcttgagatgaggaggatagctgcctacatttac
aagaaggctggcagatggaagcaatcaattgcattgtcgaagaaagataacatgtacaag
gattgcatggagacatgctcacagtctggtgatcgtgagctctcggaggacttgcttgtc
tattttatcgagcagggaaagaaagaatgttttgcttcctgcctcttcatttgctacgac
ttgattcgtgcggatgttgctcttgagcttgcatggacgaataacatgcttgacttcgct
ttcccctatctgttacagttcatccgtgagtacacgagcaaggtagatgatttagtgaag
gacaggattgaatcacagaaggaagaaaaggccaaggagagtgaagagaaggaactagtt
gctcagcagaacatgtacgctcaattgcttcctctcgccttgcctgctccgcccggtatg
atgggtggtccacctccaatgggcggtatgggcatgcctccgatgggtggaatgggtatg
ccgcctatgggtcctggtccgatgccagcatatgggatgcctccaatgggaagctactga
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integrated database retrieval system
