Lolium rigidum (rigid ryegrass): 124651856
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Entry
124651856 CDS
T09103
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00061
Fatty acid biosynthesis
lrd00071
Fatty acid degradation
lrd01100
Metabolic pathways
lrd01212
Fatty acid metabolism
lrd04146
Peroxisome
Module
lrd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124651856
00071 Fatty acid degradation
124651856
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124651856
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lrd01004
]
124651856
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124651856
Enzymes [BR:
lrd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124651856
Lipid biosynthesis proteins [BR:
lrd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124651856
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of breast milk
124651856
Exosomal proteins of breast cancer cells
124651856
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF3572
Motif
Other DBs
NCBI-GeneID:
124651856
NCBI-ProteinID:
XP_047046836
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Position
5:166519467..166531162
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AA seq
706 aa
AA seq
DB search
MSRQQEEERSPAAMDAARRRLRVVSGHFRPHADATGAALDANPTAGEYAHAQGYGVVLPE
KLQTGKWNVYRSSRSPLRLVNRFPGTPDIGTLHENFVYAVETFTDCRYLGTRVSTDGTVG
DYKWMTYGEASTNRTAIGSGLIYHGIPEGARIGLYFINRPEWIIVDHACAAYSYVSVPLY
DTLGPDAVQFIVNHATVEAIFCVPQTLSTLLSFVTQMPCVHLIVVVGGDDANTPPSTETT
GVKIITYSRLQSEGKMSSQTYRPPRPEDVATICYTSGTTGTPKGAVLSHENLIANVAGSS
LGIKFYPSDVYISYLPLAHIYERANQIALLHYGVAIGFYQGDNLKLMDDLAALRPTVFAS
VPRLYNRIYSAITNAVKESGGLKERLFRTAYNAKRQAIINGRNPSPMWDKLVFNKIKARL
GGRVRLMTSGASPLSADVMEFLRICFGGDVLEGYGMTETSCVITTMDFGDKLIGHVGSPN
PSCEVKLVDVPEMNYTSEDQPYPRGEICVRGPSIFCGYYKDEVQTRDVIDDDGWLHTGDI
GLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFIAQCFVYGDSFNSFLVAIV
AVEPDVLKAWAASQGIQNEDLRQLCADPRAKAAVLADMDSIGKEAQLRGFEFAKAVSLVP
EPFTVENGLLTPTFKVKRPQAKAYFAKELADMYAQLREAESARQKL
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcaacaggaggaggagcgatccccggcagcaatggacgccgcgcggcgccgc
ctccgcgtcgtctccgggcacttccggccgcacgcggacgccaccggcgccgccctcgac
gccaaccccaccgccggcgagtacgcccacgcgcaggggtacggcgttgttcttcctgag
aagttgcaaactggaaagtggaacgtgtaccgatcttctcggtcacctctgcgtctagtt
aataggtttcctggtactccagacattgggacgctgcatgaaaattttgtgtatgcagtt
gagactttcacggattgtagatatctgggtacaagagtgtccactgatggaacagttgga
gactacaaatggatgacatatggagaagctagtacgaacaggactgcaataggttctggt
cttatctatcatggaataccagaaggtgcacgcattggtctgtattttataaacagacct
gagtggatcatagttgatcatgcttgtgctgcatattcatatgtatctgtgccactgtat
gatactctaggtccagatgcagttcagttcattgtgaaccatgcaacagtagaagctatt
ttctgtgttcctcagacactaagcactctgctaagcttcgtaactcaaatgccatgtgtt
caccttatagtggtagttggtggagatgatgcgaatacgccaccttcaactgaaactact
ggagtgaaaattataacttactccaggctacagagcgagggaaagatgagttctcaaact
taccgtcctccaagacctgaagatgtcgctaccatctgctacactagtggcactactggc
acaccgaagggagctgttctttctcatgagaacttaatcgcaaatgtagcaggatcgagc
ctgggtattaagttttacccctccgatgtgtatatctcatatctacctttagctcacatc
tatgagagggccaatcaaattgcactgcttcactatggtgttgccattggattttaccaa
ggggataatttgaagctgatggatgatttggctgctctgagaccaaccgtattcgcaagt
gtcccccggctatataacagaatttattctgcaattacaaatgctgtgaaggagtccggt
gggttgaaggaaagattatttcgtacagcatacaatgccaagaggcaagcaattattaat
ggaagaaatccatcaccaatgtgggataagttggtatttaacaaaataaaagctaggctt
ggtggacgagtgaggcttatgacttcaggcgcatctccattgtccgcagatgtaatggaa
ttcctaagaatatgctttggtggtgatgttcttgaaggatatggaatgacagagacatct
tgtgtcatcactacaatggattttggtgacaagttaattggtcacgttggatcaccaaac
ccctcttgtgaggttaaacttgtggatgtcccagaaatgaattacacttctgaggatcaa
ccatatcctcgtggagaaatctgtgttagagggccttccatattctgtggttactataaa
gacgaagtccaaacaagagatgtcattgatgatgatggttggctgcacactggagacata
ggtttgtggctgcctggagggcgtctgaaaattattgacagaaaaaagaacattttcaag
ttagctcaaggagaatacattgctccagagaagattgagaatgtttatgctaagtgcaag
ttcattgcccaatgttttgtatatggtgatagtttcaactcttttctagttgccattgta
gcagttgaacctgatgttttgaaggcttgggctgcatcacaaggaatccagaacgaggat
ttaagacagctttgtgctgatccgagagcaaaagctgctgtcctggctgacatggattct
attggaaaggaggcacagctaagaggttttgaatttgccaaagctgttagtcttgttcct
gaaccattcacagtggaaaatggtctcctcacccccacgttcaaggtcaaaagaccacaa
gctaaggcttacttcgcaaaagaacttgcagatatgtatgcgcaactgcgtgaggccgaa
tcagctagacagaagctgtaa
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