Lolium rigidum (rigid ryegrass): 124651862
Help
Entry
124651862 CDS
T09103
Name
(RefSeq) alpha-amylase isozyme 3B-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00500
Starch and sucrose metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
124651862
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
124651862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
124651862
NCBI-ProteinID:
XP_047046841
LinkDB
All DBs
Position
5:complement(204880228..204881750)
Genome browser
AA seq
434 aa
AA seq
DB search
MGKHSASLLLIVLLCLGSCLAQAQILFQGFNWESWKKQGGWYNFLEGHVNDIAASGATHV
WLPPPSHSVAPQGYMPGRLYDLNASKYGTAAELKSLIAAFSAKGVQCVADIVINHRCADY
KDSRGIYCVFEGGTADSRLDWGPDMVCSDDTQYSNGRGHRDTGAGFAAAPDIDHLNARVQ
QELSDWLNWLKSDLGFAGWRLDFAKGYSADVAKVYVDNTKPTFVVAEIWSNLRYDGNGEP
SRNQDVDRQELVNWAQTVGGPASAFDFTTKGELQAAVQGELWRMKDGSGKAPGMIGWMPE
RAVTFVDNHDTGSTQNSWPFPSDKVMQGYAYILTHPGVPCIFYDHVFDWNLKQEISALAA
VRSRNGIHPGSKLNILAAEGDLYVAMIDDKVIMKIGSRYDLGNLIPSDFHAIAHGNNYCV
WEKSGLRVPAGRHH
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcactcggccagcctcttgctcattgtgttgctttgcctgggatcctgcttg
gcccaagcacagatcctcttccaggggtttaattgggagtcgtggaagaagcaaggcggg
tggtacaacttcctggaagggcacgtgaacgacatcgccgcctccggtgccacgcacgtc
tggctcccgccgccgtcgcactctgtggcaccgcaggggtacatgcctggccggctctac
gacctcaacgcctccaagtacggcaccgcggcggagctcaagtcgctcatcgctgccttc
agcgccaagggtgtccagtgcgtcgctgacatcgtcatcaaccaccggtgcgccgactac
aaggacagccgtggcatctactgcgtcttcgagggtggcacggccgacagccgcctcgac
tggggccccgacatggtctgcagcgacgacacgcagtactccaacggccgtggacaccgc
gacaccggcgcgggcttcgctgccgccccggacatcgaccacctcaacgcgcgcgtccag
caggagctctccgactggctcaactggctcaagtctgacctcggcttcgccggatggcgc
ctcgacttcgccaaggggtactcggccgacgtcgccaaggtgtacgtggacaacaccaag
ccgaccttcgtggtcgccgagatatggagcaacctgcgctacgacggcaacggcgagccg
tcgcgcaaccaggacgtggacaggcaggagctggtgaactgggcgcagaccgtgggcggg
ccggcctcggcgtttgacttcaccaccaagggcgagctgcaggcggcggtgcagggcgag
ctgtggcggatgaaggacggcagcggcaaggctcccgggatgatcgggtggatgccggag
agggccgtcaccttcgtcgacaaccacgacactggctccacccagaactcatggcccttc
ccctctgacaaggttatgcagggttacgcctacattctaacccacccaggagttccatgc
attttctacgaccacgtcttcgactggaacctgaagcaggagatcagcgcactggctgcg
gtcaggtcgagaaacgggattcatccgggaagcaagctgaacatcctcgccgccgaggga
gatttgtatgtggccatgattgatgacaaagttatcatgaagatcgggtcacggtacgat
ctcgggaacttgatcccgtcggacttccatgccatcgcgcatgggaacaactactgcgtc
tgggagaagagtggcctgagagtgccagcggggcggcatcactag
DBGET
integrated database retrieval system
