Lolium rigidum (rigid ryegrass): 124652254
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Entry
124652254 CDS
T09103
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124652254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124652254
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124652254
mRNA degradation factors
5'-3' decay
Decapping complex
124652254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
124652254
NCBI-ProteinID:
XP_047047228
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All DBs
Position
5:complement(114788992..114792794)
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AA seq
357 aa
AA seq
DB search
MPPPPQPNGGKVTPNLAMDAEGTRLLNLTVLQRLDPAVEDILITAGHVTLYDFNIDKNQW
SRKDVEGSLFVVKRNSQPRFQFIVMNRRNTDNLVEDLLSDFEYELQPPYLLYRNATQEVN
GIWFYNQHDCEAVASLFGRILNAYAKVPPKPKVSSIKSEFEELEAVPTSSAIDGPLEPPP
SSSAISDTLDESFANYFSNAANIGSVPSAPMTGIAHQPTEFAALISSAGATHEITASSSA
PPLPLHTNAHTSRSTNLVTPAFFVPPSSSTSLAQPASSLMPTAPPLHPSSTSSQRPPYGT
PLLQPFPPPTPPASLTPAAHNDGRIISRDLVKDALQRLVQSDEFIDLFYRELQNAHT
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgcagccgaacggggggaaggtgacgcccaacttggccatggacgcc
gagggcacgcgcctgctcaacctcaccgtcctgcagcgcctcgaccccgccgtcgaggac
atcctcatcaccgccggccacgtcacgctctacgacttcaacatcgacaaaaaccagtgg
agccggaaggacgtagagggatcgctcttcgtggtgaagaggaactcgcagcccaggttc
cagttcatcgtcatgaacaggcgcaacactgataatcttgtggaggatctattgagtgat
tttgaatatgaacttcagcctccatatttgttgtaccggaatgctacacaagaagtaaat
ggcatttggttttataatcaacacgactgcgaagccgttgcgagtctgtttggaaggatt
ctgaatgcttacgccaaagtgcccccaaagccaaaagtgtcttccataaaaagtgagttt
gaggagttagaggctgttcctacatcctctgccatcgatggcccccttgaacctcctcca
tcatctagtgcaatttctgatacccttgacgaatcattcgccaattattttagtaacgct
gccaacattgggagtgtaccaagtgcaccgatgactggaatagctcaccaacccacagag
tttgctgctctcatttcatctgctggtgcaacacatgaaattactgcttcatcatcagct
ccaccactgcccctccacactaatgcccatactagccgctcgacaaaccttgtaactccg
gcgttctttgttcctccatcctcttccacatcattggcgcaaccggcttcatccttgatg
cctacagcgccgcctcttcatccaagttctacatccagccaacgtcctccatatggtacc
ccccttcttcaaccgtttccaccaccaactcctcctgcatcacttacccctgctgcgcac
aatgatgggcgtattatttcgagggatctagttaaggatgccctccagagacttgttcag
agtgacgagttcattgatttattctaccgggagttgcagaatgcacatacatag
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