Lolium rigidum (rigid ryegrass): 124652276
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Entry
124652276 CDS
T09103
Name
(RefSeq) protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124652276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124652276
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124652276
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
U-box type E3
124652276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
Arm_2
zf-C3HC4_4
zf-Nse
HEAT_EZ
KAP
zf-C3HC4_2
zf-C3HC4
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
124652276
NCBI-ProteinID:
XP_047047250
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All DBs
Position
5:complement(55614598..55620923)
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AA seq
688 aa
AA seq
DB search
MAGDREKEQQQQPSTRHPPTSSAPERVARAVEAVAAAGEFRNAYRRQLLALSRRIRLLGP
FAEELRERRRVDETEERALAPLAAALERALDLLRLGRDGSRISLVFERDRIMKKFQEVIA
QLEQALCDFPYNELDISDEVREQVELVHTQLKRAKERVDTPDDEFYDDLISLYNKTYDPS
AELAILESLSEKLHLMTITDLTQESLALHEMVTSGGGQDPGEHIEKMSMLLKKIKDFVQT
HNPEMGPPMTSRVMESNGEQKSVIVPDEFRCPISLELMKDPVIVATGQTYERLCIEKWLA
SGHHTCPTTQQRMANTTLTPNYVLRSLISQWCETNGIEPPKRSSQPNKPMPACSSSERAN
IDGLLSKLCSPDPEEQRSAAAELRLLAKRNAHNRLCIAEAGAIPLLLSLLSSSDLRTQEH
AVTALLNLSIHEDNKASIMSSGAVPSVVHVLKNGSMEARENAAATLFSLSVVDEYKVQIG
GTGAIPALVVLLSEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGAL
MDESMAILSILSSHQEGKAAIGAAEPIPALVELIGNGSPRNRENAAAVMLHLCIGEQQLV
HLTRAHECGIMVPLRELALNGTERGKRKAVQLLERMSRFLVQQQEEQESHSRLQASSAQV
LPQPPEQVPENEIPDQIDSPASQYPMLL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaccgcgagaaggagcagcagcagcagccctccacacgccacccgccgacg
tcgtccgctccggagcgggtcgccagggcggtggaggccgtggcggcggcgggggagttc
cgcaacgcgtaccggcgccagctgctggcgctgtcccgccggattcgcctcctcgggccc
ttcgccgaggagctccgcgagcggcgccgggtggatgagacggaggagcgggcgctggcg
ccgctcgccgccgcgctggagagggcgctcgacctgctccgcctcggccgcgacgggagc
aggatctccttggtttttgaaagggatagaataatgaagaaatttcaggaagtaattgct
cagttggagcaagctttgtgtgacttcccgtacaatgaactggatatatcagatgaagtt
agagagcaggttgagttagtgcatacacagctcaaaagagcaaaagaacgggttgatacg
cctgatgatgagttctacgatgacctgatatctctgtataacaagacctatgacccaagt
gcggaactggctattcttgaaagtttgtcagaaaagcttcacctgatgactatcactgac
ctcacacaagaatcactcgctctgcatgagatggtgacatccggtggtggccaggatcca
ggagagcacattgagaagatgtcaatgctactgaagaaaatcaaggactttgtgcaaact
cacaatcctgagatgggccctccgatgacttccagagtaatggagtccaatggggagcag
aaatctgtaatcgttcctgatgaattccgatgtccaatttccctcgagctgatgaaagat
cctgttattgttgctactggacagacttacgaacgcttgtgcatcgagaaatggctagca
tctgggcaccatacttgcccgactacacaacaaaggatggcaaacacgacgttgacacca
aactatgtccttagaagtctcatctctcagtggtgtgaaaccaatgggattgaaccgccc
aagcgctcatctcagcctaacaagccgatgccggcatgctcttcaagcgaacgtgctaac
attgacggtcttctatccaagttatgctctccagaccccgaggagcagaggtcagctgct
gcagagcttcggctcctagcaaagcggaatgcacacaaccgactttgtattgctgaggct
ggtgcaattcctttgctattgagtctgctgtcgtcatctgacttacggactcaggaacat
gctgttactgcactgctgaacctctccatacacgaggacaacaaggcaagcatcatgtcc
tctggtgctgtgccgagtgttgtccatgtgctgaagaatggcagcatggaggcccgggaa
aatgctgcggccacacttttcagcctctccgtggtcgatgaatacaaagtccaaattggg
ggaacaggagctatccctgcacttgtagtgttgctaagtgagggcagccagcggggtaag
aaggacgcagcagcagccctgtttaacttgtgcatataccaagggaacaaaggccgtgcg
atacgagctggccttgtgccactcatcatgggtctggtgactaaccccacaggagctctc
atggatgagtctatggcgatactctcaatcctatccagccaccaagaggggaaggcagct
atcggcgcagcggagcctattcctgcgcttgtggagctgatcggaaacgggtcacctaga
aacagggagaatgctgcagcagtgatgctgcatctgtgcattggcgagcaacagctggta
catttaactcgtgcacatgagtgtgggatcatggtcccattgcgggagctggcactgaac
ggcacagaaagggggaagaggaaggcggtacagctgctggagcggatgagcagattcctg
gttcagcaacaagaggagcaggaatcccattctcggctgcaggcctcctcggcgcaggtc
ctaccccagccccctgaacaggtcccagaaaacgaaatccccgatcaaattgacagtcca
gcgtctcaataccctatgttgttatga
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integrated database retrieval system
