Lolium rigidum (rigid ryegrass): 124652293
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Entry
124652293 CDS
T09103
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124652293
03012 Translation factors [BR:
lrd03012
]
124652293
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
124652293
Translation factors [BR:
lrd03012
]
Eukaryotic type
Initiation factors
eIF-3
124652293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF2A
RRM_1
Beta-prop_THOC3
ANAPC4_WD40
Beta-prop_IFT122_1st
Tricorn_2nd
WD40_WDHD1_1st
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
124652293
NCBI-ProteinID:
XP_047047264
LinkDB
All DBs
Position
5:94572137..94577167
Genome browser
AA seq
718 aa
AA seq
DB search
MTIAISMDAIEAHARDLGVNLSAVDLDSIALPAGEDFGILSDDEEICQKEDLPEPEGGLS
NIVVVDNLPVVAPDKYEKLESVVRKLFNPCGAIVVFWMPTDPETQNTYGYCFIEYNTSQE
AELAREKRNGHKLDRLHILAVNVFHDFDKYMKVPDEWTAAELTPYAPGENLLKWLTDEKA
RDQFVIWAGMSTEIYWNDAKRAMPQLVYQKQYWTDSYVQWSPLGTHLATVHNQGAQVWGG
DDKFLRLMKFPHPKLKLIDFSPGERYLVTYSSEEPSKPRGTHTVVLNIFDVRSGKVMREF
KGSADDLSTGGSIAVSGVPWPIFRWGGGRDDKYFARLGKNVISVYETETFTLLDKKSLKV
ENVADFNWSPTDPIISMFVPEMGGGNQPAKVSLVQIPSRQELRQKNLFSVSDCKMYWQNN
GEYLAVQVDRYTKTKKSIYTGFELYRIKEKDIPVEVFELDNKNHKVVAFAWEPRGHRFAI
IHGDGPKHDISFYSVRTSDKASRVSKLTTIKGRQANALFWSPAGRFIVLAGLKGLNGQLE
FYNVDDLETMATGEHFMATDVMWDPTGRFLATAVTSVHEMENGFQIWSFSGKHIYKVSKD
HFYQFQWRPRPPSLLTPEKEKEISENLEMYSKKYKQEDRDMLDEKFEHESYRRKQLREEW
TRWVAKWKEQHDEERQCRMALRGGEDSDKEEEYQGKEVEVDEVVSVIEETLAFDLDQD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgcaatctcgatggacgccattgaagcgcacgcgcgcgaccttggggtcaac
ctctccgccgtcgatctcgactcgatcgccctccccgccggcgaagacttcggtatcctc
agcgatgacgaggagatatgtcagaaggaagaccttccagagcctgaggggggactttct
aatattgttgttgtggacaatctgccggttgttgctccagataagtatgagaagctagag
agtgttgtacgcaagctctttaatccatgtggtgcgatagttgtgttttggatgcctaca
gatccagagacgcagaacacctatggttactgcttcattgagtataacacttcgcaggaa
gctgaacttgcaagggaaaaaagaaacggtcataaacttgacaggttgcacatacttgct
gtaaatgtattccatgactttgacaagtacatgaaagtccctgatgaatggacggctgcc
gaactcactccatatgctcctggagagaatctgctgaagtggcttactgatgagaaagcc
agagatcagtttgtgatctgggctggtatgtcaacggaaatttactggaatgatgccaag
cgggcaatgcctcagcttgtgtaccaaaagcagtactggacggacagttatgttcagtgg
tcccctcttggaacacacttggcaacagtacataaccagggagcacaggtgtggggcggc
gatgataagtttctgcgtctaatgaaatttcctcatccaaagctgaaactgatcgacttc
tctcccggtgagaggtatttggtcacatatagcagcgaggaacccagcaagcccagaggc
acacatacggttgtcctaaatatctttgacgtacggagtggcaaagtgatgcgagagttc
aagggaagcgctgatgatctcagtactggcggaagtattgctgtttctggtgtaccatgg
cctatcttcaggtggggtggtggaagagatgataaatattttgccaggcttggcaagaat
gttatatctgtctatgaaactgagacgttcactcttcttgataagaagtccttgaaggta
gaaaatgtggcagacttcaactggtcgcccactgaccctatcatatccatgtttgtgcct
gaaatgggtggtggaaatcaacctgccaaggtgagccttgtacaaattcctagcagacag
gagctgcggcagaaaaaccttttcagtgtgagtgattgtaagatgtactggcaaaacaat
ggagaatatctcgctgtccaggtagataggtacacaaaaacaaagaagagcatttacact
ggattcgagctgtatagaatcaaggaaaaagacattccagttgaggtgtttgaattggat
aacaagaaccacaaggtagttgcctttgcttgggagcccagaggtcaccgctttgctatc
attcacggtgatggacctaagcatgatataagtttctattccgtgcgcacatctgacaag
gctagccgtgtgtccaagctcacgacaatcaagggcaggcaggctaatgcattgttctgg
tctcctgctgggcgtttcattgttcttgctgggctgaagggtttgaatggtcagttggag
ttctacaatgttgatgacctcgagacaatggcgacaggagagcattttatggcgactgac
gtcatgtgggatcctaccggaagatttctcgcgactgcagttacctcggttcatgagatg
gaaaatggtttccagatttggtccttcagtggcaagcatatatacaaggtgtcaaaggac
cacttctatcagttccagtggcgcccaaggccaccgtcgctacttactcccgagaaggag
aaagagatttcggaaaacctcgagatgtacagcaagaagtacaaacaggaggaccgagac
atgttggacgagaagttcgagcatgaaagctataggcggaagcagcttcgggaggagtgg
acacgctgggtagctaagtggaaggagcagcacgatgaggaacggcagtgcaggatggca
ctgaggggtggggaggacagcgacaaggaagaagagtatcaaggcaaggaggttgaggtg
gacgaggttgtgagcgtgatagaagaaactctcgccttcgacctggaccaggactga
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