Lolium rigidum (rigid ryegrass): 124652346
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Entry
124652346 CDS
T09103
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00061
Fatty acid biosynthesis
lrd00071
Fatty acid degradation
lrd01100
Metabolic pathways
lrd01212
Fatty acid metabolism
lrd04146
Peroxisome
Module
lrd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124652346
00071 Fatty acid degradation
124652346
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124652346
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lrd01004
]
124652346
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124652346
Enzymes [BR:
lrd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124652346
Lipid biosynthesis proteins [BR:
lrd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124652346
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of breast milk
124652346
Exosomal proteins of breast cancer cells
124652346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124652346
NCBI-ProteinID:
XP_047047325
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Position
5:103416891..103421745
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AA seq
698 aa
AA seq
DB search
MNPYFVGLLVPIAVSLLLQKRRKVEKKRGVPVDVGGEPGYAVRNHRFEHPVETHWEGVTT
LAELFEHACKEYVYMPLLGTRKLISREMEASPDGRSFEKLHLGEYEWKCYAEAFKSVCNF
SSGLIQLGHQKNERVAIFAETRAEWQIALQACFRQNISVVTIYASLGEEALCHSLNETEV
TTVVCGQKEFKKLIDIGWQLDTVKRVIYINEEGISAEVSLAKNSTSWTVASFEEVGKLGT
EAPVDANMPLPSDVAVIMYTSGSTGLPKGVMMTHRNVLATLSAVMTIVPELGKKDIYMAY
LPLAHILELAAETLMAAVGASIGYGSALTLTDTSSKIKKGTLGDASALKPTLMTAVPAIL
DRVRDGVRKKVDANGGVAKKLFDIGYSRRLAAIDGSWLGAWGVEKLLWDRLVFTKVRAIL
GGKIRFVLSGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGTFSEYDDTSVGRVGAPL
PCSYIKLIDWAEGGYLTTDSPMPRGEIVIGGPNVTKGYFKNEAKTSEVYKDDERGLRWFY
SGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALAMSPYVENIMIHADPFNSYC
VALVVVAQSELEKWATQQGLAYSDFSDLCQKQEAVKEVLGSLATVAKQARLEKFETPAKV
KLIPDPWTPESGLVTAALKLKREVLRKKYENDLAELYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaatccttatttcgttggccttcttgtgcccatcgcggtctctcttctgctccagaaa
aggcgaaaggttgaaaagaagagaggggtgcccgttgatgttggtggagagcctggctac
gcggtccgcaaccatcgatttgaacatcctgttgaaacgcactgggaaggggtcaccaca
cttgccgagctatttgagcatgcttgcaaggagtatgtctacatgcccctccttggcacc
aggaagctcatttcaagggaaatggaagcatcgcctgatgggaggtcctttgagaagctt
catctgggggagtacgagtggaaatgttacgctgaggcctttaagagcgtttgcaacttt
tcgtcagggttgattcaattaggtcaccagaagaatgagcgtgttgctatttttgctgag
acacgggccgagtggcagattgcactgcaggcatgcttcagacaaaacatatcagttgtc
accatctatgcctccttgggggaggaagcactatgccattcactaaatgagactgaggtc
acaaccgtagtatgtggtcagaaggaatttaagaagttgattgatataggctggcaactt
gacactgttaagcgtgtgatctacatcaatgaggaaggcatctcagccgaagtttctcta
gctaaaaacagcactagctggacagtcgcgtcatttgaggaagtaggcaaattaggaact
gaagcacctgttgatgcaaacatgcctctcccatctgatgttgctgtaataatgtacaca
agtggaagcactggattgcccaagggagttatgatgacccaccgcaatgtcttggctaca
ctttcagcagttatgaccattgtgcctgaactcggcaaaaaggatatatacatggcctac
cttccacttgcacacattcttgagttggcagctgagacgcttatggctgctgttggggcc
tccattggatatggatcagctttgaccttgactgatacatcaagcaaaataaaaaaaggg
actctaggtgatgcttctgcactgaagccaacactgatgactgctgtacctgctatactt
gatcgtgtccgtgatggtgtgagaaaaaaggtggatgcaaatggtggtgtagcgaagaaa
ttgtttgacattggctatagccgtcggcttgctgctatcgatggaagttggcttggtgca
tggggagtagagaaactattgtgggataggctagtcttcaccaaggtgcgtgctatattg
ggaggaaagattcgctttgtactctcaggtggagcacctctgtccggagatacgcagaga
tttatcaatatatgccttggggctccaataggccaagggtatggcctgactgaaacttgt
gctggaggaacattttctgagtatgatgacacatctgttggccgtgttggtgctccactg
ccttgttcatacattaagttgatcgactgggctgaaggtggatacttgacaactgattca
ccaatgcctcggggggagatagtcataggaggccccaatgtaacgaagggctatttcaag
aatgaagctaaaacaagtgaagtctataaggatgacgaaagaggtctgcgatggttctat
tctggtgacatcgggcgttttcatccagatggctgccttgaaatcattgaccgcaagaaa
gacatcgtgaagcttcagcatggtgaatatgtatctctggggaaggtggaagctgcgttg
gctatgagcccatatgttgagaatatcatgatccatgccgatcctttcaacagttactgt
gttgcactggtggtagttgcacaaagtgagcttgaaaaatgggcaacgcagcaaggactt
gcatacagcgacttctctgatttgtgccagaagcaagaggctgttaaagaagtgcttggg
tctttagcaacggttgcgaaacaagcacgtctagagaagtttgagacgccagccaaagtc
aagctgataccagatccatggacccctgagtcgggccttgtgacagctgccctcaagctc
aagagggaggtgctcaggaagaagtatgagaacgatctggctgagttatatgcctga
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