Lolium rigidum (rigid ryegrass): 124652442
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Entry
124652442 CDS
T09103
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124652442
03036 Chromosome and associated proteins [BR:
lrd03036
]
124652442
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124652442
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124652442
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124652442
microRNA pathway
RISC loading complex
124652442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
124652442
NCBI-ProteinID:
XP_047047412
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All DBs
Position
5:complement(153861488..>153868248)
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AA seq
881 aa
AA seq
DB search
MAAKTGGAVEVHKNDTVKRTAMARRGFGREGKPIRLLSNHFAVNLSGVDAVFYQYSVSIK
SDDDTVIDGKGIGRKVIDKMLQTYSSELAGKDFAYDGEKCLFTVGPLPQNNFEFTVIMEE
TSSRAVGGSPGHGSPSLGDKKRAKRSHLPKQFVVGISYAAKIPLRSVALALQGSDSDHAQ
DALRVLDIVLRQQQAKRGCLLVRQSFFSDDSRNLVDLTGGVSGCRGLHSSFRTTRGGLSL
NMDVSTTMIVTPGPVVNFLLTNQNVRDIRDLDWLKAKRMLKNLRVRATHNNMEFKIIGLS
DQPCYKQTFPMKVRNGSSEGQTVDITVEEYFKTKQVVLDKPYLPCLDVGKPKRPNYLPIE
LANLVSLQRYTKALSSQQRTMLVEKSRQKPQDRMRVVTDALKSNRYDDDPIFSSCGIKIE
NQLTRVDGRVLSAPMLVVGNSEDCFPSRGRWNYNNKKLFEPVKIERWAIVNFSARCDMSR
ISRDLINCGRTKGIIIERPFSLVDEDSQARRCPPIERVERMFEKVKANLPGPPEFLLCVL
PERKNCDIYGPWKKKNLHEMGIVTQCVVPSNKMNDQYFTNVLLKINAKLGGMNSKLAMEH
RHMTPMVSKIPTLILGMDVSHGSPGRSDIPSIAAVVGSRCWPLISRYRASVRTQSPKVEM
IDSLFKPLDDGKDDGIIRELLLDFYQTSDQRKPSQIIIFRDGVSESQFSQVLNLEVDQIM
KAYQNMGQGPPPKITVIIAQKNHHTKLFQADAPDNVPPGTVVDSGIVHPKQYDFYMCPHA
GPIGTSRPTHYHVLLDEIGFSPDDLQKLVLSLSYVYQRSTTAISVVAPVCYAHLAAAQMS
QFMKFEEFADTSSGSGVPSSTATVPELPRLHADVCSSMFFC
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcggctaaaacgggtggagctgtcgaagtgcataagaatgacactgtcaaacgcaca
gcaatggcaaggcgtggctttggccgtgaagggaagcccattaggttgctgtcaaaccac
tttgctgtgaaccttagtggggttgatgcggttttctaccaatacagtgtgtccatcaaa
tctgatgatgatacggtgattgatggcaagggtattggccggaaagtcattgataaaatg
ctgcaaacatacagttctgagcttgctgggaaggactttgcctatgatggcgagaaatgt
ctatttactgttgggcctcttccacagaacaacttcgagttcactgttatcatggaggaa
acatcttcaagggctgttggtggaagtcctggacatggaagccctagtcttggtgacaag
aaacgagcaaagcggtcacatcttccaaaacagtttgtagtgggtataagttatgcagca
aagatccccctcagatcagttgctttggcgcttcagggaagtgactcggatcatgcccag
gatgctctgagagtcctcgacattgttttaaggcaacaacaggctaagcgaggttgccta
cttgttaggcaatcatttttcagtgatgacagcagaaacttagttgatttaactggtggc
gtcagtggatgtcgtggactgcattctagtttccgtactaccaggggtggtttatcttta
aacatggatgtttcaaccactatgattgtgactcctggacctgttgtcaacttcctcctt
acaaatcaaaatgtcagagacattagagacctcgactggctcaaggctaagagaatgttg
aaaaatctgagagttagagctacgcacaacaacatggaatttaagatcattgggcttagt
gatcaaccatgctataaacaaacatttcctatgaaagttcggaatgggagcagcgaaggt
cagactgttgatattactgttgaggaatacttcaaaaccaagcaggtggttttggataaa
ccttatcttccatgtcttgatgtgggaaaaccaaaacgcccgaattatctcccaattgag
ctggcgaacttggtatcacttcaacgttatacaaaggcactatcttctcagcaaagaaca
atgttggttgaaaaatcacgacagaaacctcaggatcgcatgagagttgttaccgatgca
ttaaaaagtaacagatatgatgatgatccaatattttcttcctgtggcattaaaattgag
aatcagctcacgcgtgttgatggtcgtgttctgtctgcgccaatgttggttgtcggaaat
agtgaagattgttttccaagcagaggcaggtggaattataataacaagaaattatttgag
cctgtcaagattgagcgttgggcaattgttaatttctctgctcgttgtgacatgagccgg
atctctagagatctgataaactgtggacgaaccaaaggcatcattattgagcgccctttc
agccttgtggacgaggatagccaagctaggagatgtcctcctattgaaagggttgaaagg
atgtttgaaaaagttaaagcaaaccttcctggtcctccggaatttctgctttgtgttcta
ccagagaggaagaattgtgatatttacggtccatggaagaagaaaaatcttcatgagatg
ggtattgtcactcaatgcgttgttcctagtaataagatgaatgatcaatacttcaccaat
gttcttctaaagatcaatgctaagcttggcggaatgaactctaaactggcaatggagcat
cgccatatgactccaatggtcagtaagatacccacattaattctgggaatggatgtttca
catggctctccaggtcgatcagatataccgtcaatagctgctgttgttgggtccagatgt
tggccactgatatcacggtacagggcatctgtccggacccagtctccaaaggtagagatg
attgattctctttttaagccactggatgatggaaaggatgatggtataataagggagctt
ctactagacttctaccagaccagtgatcaaagaaagccgtcgcagataatcattttcagg
gacggtgtgagtgagtctcagtttagccaagtactgaatctcgaggttgatcaaataatg
aaggcttaccagaatatgggtcaggggccacctccaaagattacagttatcattgctcaa
aagaatcaccacacgaagctgttccaagctgatgcaccagataatgtcccacctgggact
gtagtggactcgggtattgttcatccaaaacagtatgatttctacatgtgtcctcatgct
ggacctataggtacctcaaggcccacccattatcatgtcttgcttgatgagattggcttc
tcgccagatgacctccaaaagctagttctctcactttcctatgtttatcagaggagcacc
actgcaatatctgtggtggcacctgtctgttacgctcaccttgcagcagcacagatgagc
cagttcatgaaattcgaggaatttgctgatacttcatctgggagtggtgtcccgtcatct
acggcgactgtccctgaactgccgcggttacatgctgatgtctgcagttcgatgttcttt
tgttga
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