Lolium rigidum (rigid ryegrass): 124652472
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Entry
124652472 CDS
T09103
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124652472
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124652472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_14
TPR_12
TPR_19
TPR_16
TPR_17
TPR_11
TPR_6
TPR_CcmH_CycH
TPR_7
TPR_9
RPN7
Fis1_TPR_C
ANAPC3
ARM_TT21_C
ARM_TT21
HAT_PRP39_C
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
124652472
NCBI-ProteinID:
XP_047047444
LinkDB
All DBs
Position
5:72621320..72625762
Genome browser
AA seq
1064 aa
AA seq
DB search
MASVYIPVQGTEEEVRVALDHLPQDASDILDILKAEQAPLHLWLIIAREYFKQGKIEQFR
QILEEGSGPEIDEYYAEVKYERIAILNALGAFHTFFGKAERAPQKEAHFKEATQYYNRAS
RIDETEPSTWIGKGQLCVAKGELQMASDSFKIVLDEDGDNFPALLGQASVYFLMGDAEQQ
HKKALECYRNSLDLYKRALRAYTDCPPAVRLGIAFCRYKLGQLDRARQAFERVLQLDPEN
VDALVALAIMDLQTNEAGGIRRGMEKMGRAFEIYPYCTLALNHLANHYFFTGQHFVVEQL
TETALSSSNHGLLKSQSYYNLARSYHSKGDIETAGRYYMASVKEINKPQDFVLPFVGLGQ
IHLKFGDYKRSLASFEKVLEVHPENCESLKAIGNIYTNLGENDKAIETFKKVTRIDPKDH
QAFVELGELLVESDWAAAMEYLKTARSLLKKASEKIPVELLNGIGLLYFEKAEFELAEQS
FKEALGDGIWVSMMDGSVGRSMVSWSVQYRDQTFFHQLEEQMPVELPCDKVTTLFNYARL
LEELQDTVKASLLYRLIIFKYPDYIDAYLRLAAIAKGKNNIQLSIELIGDALKINSKYPN
ALSMLGSLELQSDENWLTAKERFRDAKDATGGKDPYSLLQLGNWNYFAANRPEKKASKFE
ATHREKAKELFLNVLKQNQSNMFAANGIGILHAEKAQWDIAKELFTQVHEAASGSIFVQV
PDVWINLAHIYFAQGLFQQAVKTYQNCLRKFFYNTDATILLYLARTHYEAEQWQECRNSL
LRAIHLAPSNYLLRFNVGVSMQKFSASTLQKTKRTADEVRATVSELENAIRVFSLLSVAS
TYHSHGFDERKIETHVEYCKHLLDAAKVHRDAAEQAEQQTKQRLEVTRQIALADEARRRA
EEQRKFQLERRKQEDELKQVMQQEQHFERVKEQWKHSSNSAGKRKDRSKHDDEDGESGKR
RRKGGKRRKDQKTKMQYEEEEEDQYRNEPEEDDYATMTGGDRSGKAPDHLLAAAGLEDSD
AEDETGHPQSAIERKRRSAWSESDDDEPARRPAEPSPRADDPSE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtgtacatcccggtgcagggcacggaggaggaggtgcgggtggcgctggac
cacctcccccaggacgcctccgacatcctcgacatcctcaaggccgagcaagcccctctc
cacctctggctcatcatcgcgagagagtacttcaagcaaggaaagatagaacagttccga
cagattctagaggaaggatctggccctgaaattgatgagtattatgctgaagtgaagtac
gagcggatagccatccttaatgctctgggtgctttccatactttcttcggaaaggccgag
agagcaccgcagaaggaagcgcatttcaaggaggccacgcagtactacaatagggcatcc
aggatagacgaaactgagccatctacatggattggaaaaggtcaactctgtgtggccaag
ggtgagctgcaaatggcatccgactcattcaagattgtgctggatgaggatggggataat
ttcccagccctacttggtcaggcttctgtttatttcctgatgggtgatgcggaacagcaa
cacaaaaaagctttggaatgttacaggaactcgttagatctctataagagagctctgcgg
gcctatacagattgtcctcctgctgtaaggcttggtatagctttttgtcgatacaaactt
ggtcagctagacagggctcgacaagcttttgaacgagttttgcagttggaccctgaaaat
gttgacgcactagtagcacttgcaatcatggacttgcaaacaaatgaggccggtggcatt
cgcagagggatggaaaaaatgggaagagcctttgaaatctatccttattgcactttggca
ctcaaccacctggccaaccattatttctttactggccagcattttgtggttgagcaactg
actgagactgctctctcttcaagcaatcacgggctactgaaatcacagtcctactataac
ttggccagatcataccatagtaagggggacattgagactgctggacggtattatatggca
tctgtcaaagaaatcaataaaccgcaagactttgtgttgccatttgttggacttggtcaa
atacacctgaaatttggtgactacaaacgttccttagctagctttgagaaagttctggag
gtacaccctgaaaattgtgaaagtctaaaggccattgggaacatctacacaaacttaggt
gaaaatgacaaagccatagaaaccttcaagaaagttacacggattgatccaaaagatcac
caggcatttgttgaactcggtgaattgttggtggaatcagattgggctgctgccatggaa
tacttgaaaacagcacgtagtctcctaaagaaggcaagtgagaaaatacctgttgagttg
ctcaatggaattggacttctttattttgaaaaggcggagtttgagctggctgaacaaagc
tttaaggaggcactaggagatggtatctgggtttcaatgatggatgggagcgttggtaga
tctatggttagctggagtgtacagtacagggatcagactttctttcaccaacttgaagaa
caaatgcctgttgagttaccttgcgataaggtaaccacattgttcaactatgcaagatta
ctggaagagcttcaggatactgtgaaagccagcctcctttaccgtctcattattttcaag
tacccagactacattgatgcctatctgaggctagcggctattgcaaaaggaaaaaacaat
attcaactgagcattgagctgataggtgatgctctgaagataaacagtaagtatccgaat
gcactgtctatgcttggaagtcttgaactccagagtgatgaaaactggctcactgcaaag
gaacgtttccgtgatgctaaagatgctactgggggaaaagacccatactctttgcttcag
ctggggaactggaactactttgctgccaatcgccctgagaaaaaggcctcaaaatttgag
gctactcatcgggagaaagcaaaggagctatttttgaacgtactaaagcagaatcagagt
aatatgttcgctgcaaatggtattggaatcttacatgccgagaaagcccaatgggatatt
gccaaggagttatttacccaggtacatgaggctgcatcaggaagtatatttgttcaggta
cctgatgtatggatcaatttggctcatatatattttgctcaaggcctttttcaacaagca
gttaagacgtaccaaaattgcctgcggaagttcttctacaacacagatgcaactatactc
ctataccttgcccgaacacattatgaagctgaacaatggcaagagtgccggaactctttg
ctgagagctatacatttggctccatccaattatttgttacggtttaatgtcggcgtttca
atgcagaagttctcagcttctactctacagaagacaaaaagaacagctgatgaggttcgt
gcaacagtgagtgagcttgagaatgccatcagggtgttcagcctgttgtctgttgcatcg
acgtaccattcccatggtttcgatgagaggaaaatagaaacgcatgtggagtattgcaaa
catttacttgatgctgcaaaggttcatcgtgatgcagctgaacaagctgagcagcaaacc
aagcaaaggttggaagttacccgccaaattgctttggctgatgaagctcgccggagggct
gaagagcagaggaagtttcagctagaaagaaggaagcaagaggacgaattaaagcaagta
atgcagcaggagcagcactttgagcgtgtcaaggaacaatggaaacattccagcaacagc
gctggcaagaggaaggatagatccaagcatgacgatgaagacggggaaagtgggaagagg
aggaggaagggtggcaagaggaggaaggatcagaagacaaagatgcaatacgaggaagag
gaagaggatcaatacagaaatgaaccagaagaagatgattatgcaactatgactggcggt
gacaggtcagggaaagcccccgatcaccttcttgcggctgctggtcttgaagattctgac
gctgaagatgaaacgggacatccccagtctgcgatagagcgaaagagacgatcggcatgg
tcagaatctgatgatgatgaaccagcacggaggccagcggaacctagcccacgcgcagac
gatccgagtgaatga
DBGET
integrated database retrieval system
