KEGG   Lolium rigidum (rigid ryegrass): 124652631
Entry
124652631         CDS       T09103                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    124652631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124652631
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     124652631
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz DUF3337 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_DCAF12 RAWUL Beta-prop_Vps41 Beta-prop_Nup120_160 Toxin_21
Other DBs
NCBI-GeneID: 124652631
NCBI-ProteinID: XP_047047630
LinkDB
Position
5:106954471..106962756
AA seq 755 aa
MHRVGSAGNAAGSTRPRKEKRFTYVLNDADNKKHCAGINCLSYLNASASGTSDYLFTGSR
DGTLKRWEYQNGDANFSATFESHVDWVNDAILVGQNLVSCSSDTTIKVWNCLSDGACTKT
LRQHSDYVICLAAAEKNSNIVASGGLGGEVFIWDLDAALAPVTKSVDAKEDEIPNGNSGP
ALSTLCNVNSSGNIASTNGKPHGYSPIAAKGHKDSVYALAMNDTGTLLVSGGTEKVVRVW
DPRTGSKNMKLRGHTDNIRALLIDSTGRYCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSV
WALATTPSFGHVYSGGRDQSVYLTDLSTRESVLLCTNEHPILQLSLQDDTIWVATTDSSV
YGWPAEGQTPQKVFQKGGSFLAGNLSFSRARASLEGSAPVPVYKEPSFTIPGVPAIVQHE
IMNNRRHVLTKDTVGSVKLWEITRGAVIEDFGKVSFEDKKKELFEMVSIPAWFTMDARLG
CLSVHLDTPQCFSAEIYAVDLNVTGAQEDLKINLAHETLRGLLVHWSKRRPKPGPHSLSN
GDGSIGKDVSLKSSPHPRSEVDDGAENHANNVLPSFEFSTVSPPSIITESSSGGPWRKRI
TDLDGTEDDLPWWCVDCAENSRFPKENTKCGFYLHAAEGSPAPNITQGKLSAPRILRVLK
VANYVVEKLVLEKPLDGSPDSTFGMGLTSGPSQLTTLDSSSRLGLKSWQKLKPSVEILCN
NQQVLSPEMSLATVRTYIWKKPEDLILNYRVVQYR
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgcatcgtgtcgggagtgctggaaacgcagctggttcaactcgaccaagaaaggagaag
cgttttacatatgtgctcaacgatgctgataataaaaagcattgtgctgggatcaactgc
ttgtcttacctgaacgcttctgcttctggtacaagcgattatctctttactgggagtcgt
gatggtaccttgaagagatgggaataccaaaatggggatgcaaacttttcagcaactttt
gagtcacatgttgattgggttaatgatgccattcttgttggccaaaatcttgtttcatgt
tcctcagacaccactataaaggtgtggaattgcttatcagatggtgcttgtacaaagacc
ctccgccagcattctgattatgtgatctgtcttgctgcagctgaaaagaatagcaatatc
gtagcctctggtggccttggtggtgaggtcttcatatgggatcttgatgctgctcttgct
cctgtaaccaaatctgtagatgcaaaagaggacgagattcctaatggaaattctggacct
gctttgtcaaccttgtgcaatgtaaattctagtggcaacattgcttccaccaacgggaaa
ccacatgggtacagtccaattgctgccaaaggtcacaaggattcagtttatgcactggct
atgaatgatacaggaaccttgcttgtctctggtggtactgaaaaggttgttcgtgtttgg
gatcctaggacaggttcaaaaaacatgaaattgagagggcacactgacaatatcagggct
ttgcttattgattccacgggaaggtattgtctatcaggctcatctgattcaatgataaga
ctatgggatctaggacagcaacgctgtgtgcattcttatgctgttcatactgattcagtt
tgggcgcttgcaacgaccccttcatttggtcatgtttatagcggtggcagagatcagtcc
gtatacttgacagatctgtccacgcgagagagtgtgttactgtgcacaaatgaacaccca
atcctacagttgtccttgcaagatgatacaatatgggttgcaacaactgattcttctgtt
tatggatggccagctgaagggcagacaccacaaaaagtttttcaaaagggtggctcgttc
ttagctgggaatttgtcattctcaagggcaagagcttctttagaaggatcagcacctgta
cctgtatacaaagagccatctttcactattcctggagttccagcaatagttcaacatgag
atcatgaataatagaaggcatgtcctgacaaaggatactgttggttcggtcaaattatgg
gagattactcgaggagctgttattgaagactttggcaaggtttcttttgaggataaaaaa
aaggagttatttgagatggttagcatacctgcgtggtttaccatggacgctcgattggga
tgtttgtctgtccacctggatactccacaatgcttttctgcagaaatatatgcagttgac
ttgaatgttactggagcacaggaagatcttaagattaatttggctcacgagactcttcgt
ggtttgttagttcactggagtaaacgaaggccgaaacctggcccacatagcttgtcaaat
ggcgacggttcaatagggaaagatgtatcattgaaaagttcaccccatccaagatctgag
gtggatgatggagccgagaaccatgcaaacaatgtgcttccttcgtttgagttctcgacg
gtttcacctccatcaattatcacagaaagttctagtggaggaccttggcgaaagagaatt
actgatttggatggaactgaggacgatctcccgtggtggtgtgtggactgtgccgagaac
agtcggtttccaaaagagaatacgaagtgtggcttttatttgcatgcggctgaaggctcg
cctgcaccaaacattacacaagggaaactcagtgctccacggatactgcgggttctcaaa
gttgctaactacgtggttgagaagcttgtcctcgagaaaccgttggatggaagtcctgac
agcacatttggcatgggtttgacctctggtccatcacaactcacgaccctagatagttct
tcaaggcttggactaaagtcatggcaaaaactaaaaccttctgttgagatattgtgcaac
aaccagcaggtcctgtcgcctgagatgagtttagcgacggtgcgaacatatatttggaag
aagccagaggatctgattcttaattacagagtggtgcaatatagataa

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