KEGG   Lolium rigidum (rigid ryegrass): 124652779
Entry
124652779         CDS       T09103                                 
Name
(RefSeq) TATA-box-binding protein 2
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    124652779
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lrd03000]
    124652779
   03021 Transcription machinery [BR:lrd03021]
    124652779
Transcription factors [BR:lrd03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    124652779
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     124652779
  RNA polymerase III system
    TFIIIB
     124652779
  RNA polymerase I system
    SL1/TIF-1B
     124652779
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 124652779
NCBI-ProteinID: XP_047047777
LinkDB
Position
5:complement(46638705..46644354)
AA seq 202 aa
MAAAEAALEGSEPVDLSLHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFA
AVIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLSFPAKFKDFKIQNI
VASCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMRQPKIVLLIFVSGKIVLTGAKVR
EQTYTAFENIYPVLTEFRKVQQ
NT seq 609 nt   +upstreamnt  +downstreamnt
atggcggcggcggaggcggcgctggaggggagcgagccggtcgatctctccctgcacccc
tccggcatcgtccccacgctccagaatatagtgtcaacggtcaacttagactgtaaattg
gacctgaaagcaatagctcttcaggcacgcaatgcagaatataaccccaagcgttttgct
gcagttatcatgcggataagagaaccaaaaactactgcactgatattcgcatctggaaaa
atggtctgcactggagcaaagagtgaacagcaatcgaaacttgctgctagaaagtatgct
cgtataatccagaagcttagctttcctgcaaaattcaaggacttcaagatccagaatatt
gttgcatcttgtgatgtcaaattccctataaggcttgagggcctcgcatattctcatggc
gctttctcaagttatgagccagagctatttcctggcctgatttatcggatgaggcagcct
aagattgtcctactaatttttgtttcaggcaagattgttctgactggagcaaaggtgaga
gaacagacgtatacagcctttgagaacatatatcctgtcctcacagagttcagaaaagtt
cagcaatga

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