Lolium rigidum (rigid ryegrass): 124652909
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Entry
124652909 CDS
T09103
Name
(RefSeq) vacuolar protein-sorting-associated protein 33 homolog isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04142
Lysosome biogenesis
lrd04145
Phagocytosis
lrd04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
124652909
04142 Lysosome biogenesis
124652909
04148 Efferocytosis
124652909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124652909
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124652909
Hops complex
124652909
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
Peptidase_C97
Motif
Other DBs
NCBI-GeneID:
124652909
NCBI-ProteinID:
XP_047047910
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All DBs
Position
5:55665577..55683924
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AA seq
633 aa
AA seq
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MAQIPNLDNSPLNLNALREQSRKDLLNIVESVRCSSCTPRCDLLYSCWHSQESESLLVYQ
IRGNKCLVIDPKLAGTLSLVLQTSVLKEYGAELRILSADPLQTGCSKVVYLVRSQPNYMK
FVADQMKNDEAKGLRRDYFLYFVPCRTIACEKILEEEKVHQKLTIGEYPLYLVPLDEDVL
SFELEYSLQECLIEGDTSSVWHVAKAIHKLEFAFGVIPNIRAKGVASTKATELLNNMQLE
DPVNMDNMGMPEIDTLILLDREVDMVTPMCSQLTYEGLLDELLEIHNGTVEVDASIMGAQ
QDGKKVKVPLNSSDKLYKEIRDLNLPVAVQVVHQKATSIQQDYAEVKSTNTQSVSELKDF
VKRLNSLPEITRHVNLAQHLKSSATKRSFFALVEIEQIIREVENYETPRCFEYIEDIIQK
QEPIETVLRLLVLFSLTNAGLPKKNFDYLRREILHSYGFEHMPLLYNLEKAGLVKRQESR
SNWVGISRALQLIIDIKDPEKPPDDISYIFSGYVPLSIRLVQHAVRSGWQPIEELLKLLP
GPHLDLKRGVSTISSSLEVFPGSVGQQSPDRGGLRSLVLVVFIGGVTSAEIAALRFLSAQ
EGMGYDFLVATTKVITGNTLLRPIIASSKEGTI
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagatccctaacctcgacaactccccgctcaatctcaatgcgctcagggagcag
tcacggaaggacctacttaacatagttgagagtgtacgttgctcctcctgcactccccgt
tgcgatcttctgtattcgtgttggcactctcaagagtctgaatcccttcttgtgtatcag
attagagggaacaagtgtctggtcattgatcccaagctcgcgggtaccctctcgctggtc
ctgcagacctcggtgctcaaggaatatggcgccgagctgcggattctctctgctgaccct
ctgcagacggggtgctccaaagtggtgtatcttgttcgctcgcaaccgaactacatgaaa
tttgttgcagatcaaatgaagaatgatgaagccaaagggctacggagggattattttctg
tatttcgtaccatgccgtacaattgcctgtgagaagattctggaggaagagaaagttcat
caaaagttaacaattggagaatatcccttgtatctagttccattggatgaggatgtcctt
tcttttgagcttgaatattccttgcaggaatgtcttattgaaggagatacaagctctgtc
tggcacgttgcaaaagccattcataagttagagtttgcctttggagttatccccaatatt
agggccaagggtgtagcatcaaccaaagctacagagttgctgaacaatatgcaactagaa
gatcctgtcaacatggataatatggggatgccagagattgacaccctcattttgctagac
agagaggtggatatggtgacaccaatgtgttctcagttgacatatgaaggtctattagac
gagttattggaaattcacaacggaactgtggaagttgatgccagcattatgggggcccaa
caagatggaaaaaaggtcaaggttccactcaattcaagtgataagttgtacaaggagatt
cgagacctcaacttgcctgttgcagttcaggttgtgcaccaaaaagcaacatctattcag
caagattatgcagaagtaaaatccacaaatacacagtcggtttctgagctgaaggatttt
gtgaagaggttaaactcgctgccggagataactcggcatgttaatttggcacaacatttg
aaatcatctgcgacaaaacgctcattttttgccctagtagagattgaacaaataatacgg
gaggtggagaactatgaaacccccaggtgcttcgagtacattgaagacataatacagaag
caagaacctattgaaactgttcttcgccttctagtgttattttcccttacaaatgctggg
ttgccaaagaagaattttgactacttaaggcgggaaatactgcatagttatggctttgag
catatgcccttgttatacaatctggaaaaagccggccttgttaagaggcaggaatcgagg
agtaattgggttggtattagcagagctctgcagcttataattgatataaaggatcctgaa
aagcctcctgatgatatatcgtacatcttttctggatatgtacctcttagtattcgcctt
gttcagcatgcagtgaggtctggatggcaacctattgaagaactgttaaagttattgcct
ggtcctcatctggatttgaaaagaggtgtttcgaccattagttcttcattggaagtattc
ccaggttccgtgggacaacagagtcctgaccggggtggtcttcgctcccttgttctggtt
gtatttattggtggcgtaacatctgctgagattgctgcacttcgattccttagtgcacag
gaaggaatgggctacgacttcctggttgcaactacaaaggttatcactggcaacacattg
ctgagaccaattatagccagcagcaaagaggggacgatttaa
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