Lolium rigidum (rigid ryegrass): 124652951
Help
Entry
124652951 CDS
T09103
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124652951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124652951
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124652951
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124652951
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
124652951
NCBI-ProteinID:
XP_047047957
LinkDB
All DBs
Position
5:190465000..190466057
Genome browser
AA seq
279 aa
AA seq
DB search
MATPAVEKPDGVEIREVWADNLEAEFAVIRDIVDDYPYVAMDTEFPGVVCRPLGTFKSPA
DFNYATLKANVDMLKLIQLGLTFSDAHGALPTPAPNHRPCVWQFNFRGFDPRTDVAAADS
IDLLRRSGIDFARHAADGACARRFAELLMSSGVVLNPEIHWVTFHSGYDFGYLLKLLTGS
SLPDTSAGFFDLIRIYFPVVYDIKHLMRFCNSLHGGLNKLAELLDVERVGICHQAGSDSL
LTALSFNKLKDSYFGGLTERYAGVLYGLGTEGGEATSVH
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggccgtcgagaagcccgacggtgtcgagatccgcgaggtgtgggcggac
aacctcgaagccgagttcgccgtgatcagggacatcgtggacgactacccgtacgtggcc
atggacacggagttcccgggcgtggtgtgccgcccgctcggcaccttcaagtcccccgcc
gacttcaactacgccacgctcaaggccaacgtcgacatgctcaagctcatccagctgggc
ctcaccttctccgacgcccacggcgccctccccacccccgcccccaaccaccgcccctgc
gtctggcagttcaacttccggggcttcgacccgcgcacggacgtggcggccgccgactcc
atcgacctgctccggcgcagcgggatcgacttcgcgcgccacgccgccgacggcgcgtgc
gcgcgccgcttcgccgagctgctcatgtcctccggcgtggtcctcaacccggagatccac
tgggtcaccttccacagcggctacgacttcgggtacctgctcaagctgctcacggggtcc
tccctgcccgacaccagcgcgggcttcttcgacctcatccggatctacttccccgtcgtc
tacgacatcaagcacctcatgcgcttctgcaacagcctccacggcggcctcaacaagctc
gccgagctgctcgacgtcgagcgggtcgggatctgccaccaggccggatccgactcgctg
ctcaccgcgctctcgtttaacaagctcaaggactcctactttggtgggttgaccgagaga
tacgccggtgtgttgtatggtctaggcacggagggtggggaagccacctctgttcactga
DBGET
integrated database retrieval system
