Lolium rigidum (rigid ryegrass): 124652978
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Entry
124652978 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124652978
KO
K13144
integrator complex subunit 7
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124652978
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124652978
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS7_C_plants
INTS7_N
INTS7_HB
Motif
Other DBs
NCBI-GeneID:
124652978
NCBI-ProteinID:
XP_047047986
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All DBs
Position
5:80466236..80470951
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AA seq
1208 aa
AA seq
DB search
MERIPAASAMDWSIDLDRSLRSRHLGTRLQALDAAAPRIRELASCPAVPAGVASASGIMP
AESRIFAETMLLRLATEFRAAADDSIRCRIVRSLLPNKGGGWAAAEPEQILRRVTAAHGA
AGATPRARALALRMFGCLADLAKDSVHVRSLVLSGLRSSNAAEVKAALFAAGCFCKLSED
FSCITLQVLAGLVTSPTSEAQVIIAAIKTFSKLDCTLAVIRRVREVGKEMVLGNLEDVFK
AEMLFALSRLASKSIVFFGDQVEFLLLFLGHESSLPMKSMALKCLCFMFRRNTFYLPVAS
TVFGTLLHLIDDEGFPLECKSYALRILQKMLCVKGPTIRHINASELTKLALAAERFLHCS
SWEMLDTALRILVDIFFCFHKQTKPHQTISTLGSSSFSNTGHQGISNNMLATHEENSEDE
SSLNKILTVIMDHIIPLANQLSNRSKEVETRQTNMSSCEQEKCRTLFSLMLKLVSGYPSA
ASVALDKVRCLIKELARINASHYSDVAASCVESFVAQEQFRASDDTTEPATASIKASHME
TDTDKSLASTDFCSKKSSVVHDLILCTLQFANACHDMCCRTSGSSCNPHHSIKGLTECIQ
QNASQYCSTYEFFRLIMSARISWNTCKVRNDIGNKESGGKEYPEIFSTPGWIAHELCALR
MAKMLTRKQSYWEAYRSAMYCCREGLWFTASFVFRKVSGAFESGSFSFWFKSLLLFGAGE
LEMKLLVFPSAINKLVGELNTEGVLHEDLYCIDTDADSTLARSQELHGCQEKITGICERT
CLANDVLASNSSSDCEFFFQRWFISLRASFLEILTDVLGILSAHSSAPKDISHLESRGDS
CSVATEDNQVLLALTNCSLRLSDLAKSYDLLDASHGDMDHQSFSTVARLAFMCSLLSFCT
VFSLDFSNLPSSSEPCRLPERFSHASVLQDLHERVDRKDSQVLSQLRQFISVSSHELDSV
QFSTRMNCSGYLEKDTYSLFKFAVASLLRARADAKGVATTREDTLSQFHRGMQFLSSILH
RLMELPFVLPKYFFSVRPCFGAELFIFDSNPANRDGVSISPGSQLSLTLCLQWKCVLERT
RIRIAKLYCILATSPSLHLHTAGTRSKQFEMRRTAEMVVLNSRLLRHIKRDPRKTCENKS
SRPETDLVTAFACFTPDGGGQGFSDCLLDVSLFPVGSYQVAWQACCVDENGGYFSLLPLN
DGVVVSVR
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattccggcggcctccgccatggactggagcatcgacctcgacaggagcctc
cgctcccgccacctaggcacgcgccttcaggccctcgacgccgccgccccacgcatccgc
gagctcgcttcttgccctgccgtcccggcgggtgtagcctctgcgtccggcatcatgccc
gccgaatcccgcatcttcgccgagaccatgctcctccgcctcgccaccgagttcagggcc
gccgccgacgactccatccggtgccgcatcgtccgctccctcctcccgaacaagggcggc
ggttgggcggcggcggagcccgagcagatactccgtagggtcacggcggcgcacggcgcg
gcaggggcgaccccgcgggccagggcgctcgcgcttaggatgttcggctgcctcgccgac
cttgccaaggacagcgtccacgttcgctccctcgtcctctccggcctccgctcctccaat
gctgccgaggtcaaagctgcattgtttgcggctggttgcttttgtaagctgtcagaggac
ttctcatgcatcacccttcaagtgctggctggtttagttacctcaccaacatcagaagct
caagttattatagcagcaatcaagactttctcgaagcttgattgtacgttggctgttatc
cgtagagttcgtgaggttggaaaggagatggttctaggcaacctggaagatgtattcaaa
gctgaaatgctcttcgcactgtccaggctggcgtccaagtctattgttttctttggtgac
caggtggaatttctgttattatttctgggacatgaatcttctcttcctatgaagagtatg
gctttaaaatgtttatgttttatgtttcgcagaaatactttctatcttcctgttgccagt
actgtttttggcacattgcttcatctcattgatgatgagggttttccacttgagtgcaag
agctatgcactcaggatcctgcaaaagatgctttgtgttaaaggtccaaccattcggcat
atcaatgcttctgagttaaccaagcttgctctggctgctgaaaggtttttgcattgctct
tcctgggagatgctggatactgctctcagaattctggtggatatcttcttttgcttccac
aagcaaacaaagccacatcagactataagtactttggggagttcatcattctctaacact
gggcaccaaggaatttcgaacaacatgctggcaactcatgaagaaaatagcgaggatgaa
tcatctctgaataagattctaacagtaataatggatcatattatacctctggccaatcag
ctcagcaatagaagcaaggaagtagaaaccagacaaaccaacatgtcctcctgtgaacag
gagaaatgcaggacactattcagcctcatgctaaagcttgtttcaggctacccttctgct
gcttctgttgctcttgataaagtaaggtgcctgataaaagaactggctcgaataaatgcc
agtcattactccgacgtggcagctagctgtgttgaatcttttgttgctcaggagcagttt
agagcttcagatgatactactgaaccagcaactgcaagtattaaagcttctcacatggaa
actgacactgataaaagtttagcttccactgacttttgcagtaagaaatcatctgtagtg
catgatctaattctttgcacgcttcagtttgcaaatgcctgtcatgatatgtgttgtaga
acatctggctcttcctgcaatcctcaccatagtatcaagggtctaactgaatgtatacag
cagaacgcttctcagtattgtagcacatatgaattcttccgccttataatgtctgcccgt
atctcatggaatacttgtaaagtcaggaatgatattggtaacaaagaatcaggtggaaaa
gagtacccggagatattctccactcctggttggatagctcatgaattgtgtgcgctccgg
atggccaaaatgcttacaagaaaacagagctattgggaagcctataggtctgctatgtac
tgctgtcgggaaggtctctggttcactgcatcatttgtcttcagaaaagtttcaggtgct
tttgagtcgggctcctttagtttttggttcaagtcactgcttctttttggtgctggggaa
cttgagatgaagctattggtttttccttcagcaatcaataagttggttggtgagctaaat
acagagggagttcttcatgaggatctctactgtattgacacagatgctgacagtactctt
gctagatctcaagagttgcacggctgtcaagaaaagataactggtatttgtgagagaaca
tgcttagcaaatgatgtcctcgcatcgaattcctcttcagactgtgaattcttcttccag
aggtggttcattagtctgagagcgtcttttcttgagatcctaactgatgttcttggcatc
cttagtgcacattcttctgctcccaaagacatatcacatcttgaatcaagaggagactct
tgtagtgtagccacagaggacaaccaagtcctactagctttgactaactgttctttaagg
ctgagtgacctagcaaagagctatgatctcctagatgcatcccatggggacatggatcac
caaagctttagtactgtggccaggcttgctttcatgtgctcgcttttgtcgttttgtact
gtgttttctctggatttctcaaacctacctagcagttcagagccttgcaggcttccagag
agattttcgcatgcttcagtcctacaagatttacatgaaagggtagataggaaagacagc
caggttctgtcccaactaagacagttcatttctgtttcttctcatgaactggactcagta
cagttcagcacacggatgaactgttcaggttatctggaaaaggatacttattctctcttc
aagtttgcggtggcatctttgcttcgtgcgcgtgcagatgccaaaggagtagcaacaact
agagaggacactttatctcagtttcatagagggatgcaatttctgtctagcattttgcac
aggttgatggaattgccttttgttcttcccaaatacttcttcagcgtaaggccttgcttt
ggcgccgagctcttcatatttgattccaaccctgcaaacagagatggagtatcaatatcg
cccggttcccagctgtccctgactctctgcctgcagtggaagtgcgtgctagagaggact
cgcatccgcatcgcgaaactctactgcatcctcgccacaagcccatcattgcacttacac
accgcaggaacgaggagcaagcagtttgagatgcgcaggactgccgagatggtcgtgctg
aactccaggctgctgcggcacataaagcgcgatccgaggaagacctgcgagaataagagt
tcccgtcccgagacggacctggtgactgcgttcgcgtgtttcacaccggatggcggcggg
cagggattctcggactgcctgctggacgtctccttgtttcctgttggttcgtatcaggta
gcgtggcaggcgtgctgcgtggacgagaacggcgggtactttagcttgctgccgttaaat
gacggtgttgttgtttctgttcggtag
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integrated database retrieval system
