Lolium rigidum (rigid ryegrass): 124652998
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Entry
124652998 CDS
T09103
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124652998
Spliceosome [BR:
lrd03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
124652998
Other components
Complex C specific factors
124652998
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
124652998
NCBI-ProteinID:
XP_047048003
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Position
5:complement(118777197..118780237)
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AA seq
844 aa
AA seq
DB search
MEEDAEGMDRLDMDGDFVGGRFGRDGEFYYESRRERAPQTRDDALYGVFADGDSDFDSEE
DEASRRRRRRKRRRDEAEPDLTRPVQFVSKGVTDPQQPEEEPEEQRPGLGQAASSSRTVA
AEEDAEEDQEEYIDLPTGFGQRIAEGARARREEKERQEESAKRRRKAQSAGFEPGKPAPA
PGSLESNAKVAKMMAMMGYKRGEGLGKNAQGITAPVETTLRPKNAGLGSVEGFKEPKAFT
PKEKLPPLPPAPPAKKEKQRWSKKASVKKDQVMTKNELLARRAEQEHDEQPAFVQKVIDM
RGPQARVLTDLKGLSTEHEMEANDVPMPELQYNVRLLVEETEADIVRLDGQLRREQEKVA
SLVREKEKAAKQEALQKHQLQVMEAIAGVLEQVRVDDTTGLLTLGGLLKTFQELKLRYEE
EFKMCSVAWVACRFAHPLLIRVFQGWQPLQNPSFGLEVMSSWKDLLQGDQPYDFSDATES
MAPYAQLVSEVILPAVRISGTNSWEARDPEPMLRFLESWERLLPPIVLHSILEHVIMPKL
TAAVDSWDPRREKVPIHVWVHPWLPTLGQRIETLCHSIRYKLSSVLHVWQAHDSSAYAVL
SPWKGVFDTASWEGLILRYIVPKLQMALQEFQINPASQKFDQFNWVMIWASAVPVHHMVH
MLEVDFFSKWQQVLYHWLCSPNPDFNEIMNWYKGWRGLFPPELLANERIRMLLTSGLEMM
NQAAEGLELVQPGARENVGFLRATEKRQFDAAQQASHRAVPGAAMSDMSFKDSIQEYAVD
QGLLFMPRVGKFYKGMPVYEFGTVSVCIDSAKRLLYAQLQEGAERWSSVSLTQLLEMNRM
ARPR
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgccgagggcatggaccgcctcgacatggacggcgacttcgtgggcggc
cgcttcggccgcgacggggagttctactacgagagccgccgcgagcgcgcgccccagacc
cgcgacgacgccctctacggcgtcttcgccgacggggactccgacttcgactccgaggag
gacgaggcgtcgcgccggcggcggcggcgcaagcgacgccgggacgaggccgagcctgac
ctcaccaggcccgtgcagttcgtctccaagggcgtcactgacccccaacagcccgaggag
gagccggaggagcagcggcctgggcttggccaggctgcgtcctcctcgcgcacagtcgcc
gccgaggaggatgcggaggaggaccaggaagagtacatcgacctgcctacggggttcggg
cagcggattgccgagggtgcgcgcgcaaggcgggaggagaaggagcggcaggaggagtca
gccaagcgccgccgcaaggcgcagtcggcagggtttgagcctgggaaaccagcgccggcc
cccgggagcctggagtccaacgcgaaggtggctaagatgatggctatgatggggtacaag
agaggggaaggcctaggcaagaatgctcaggggatcaccgcgccggtggagaccaccttg
cgccccaagaacgccgggctcggcagcgtcgaggggtttaaggagcccaaagcgttcacc
cccaaggagaagctgcctcccctgccgcctgcaccgcctgccaagaaggagaaacagcgg
tggtccaagaaggccagcgtgaagaaagatcaggtcatgacgaagaatgagctgctggcg
aggcgtgccgagcaggaacatgacgagcagcccgcgtttgtccagaaggttattgacatg
cgagggcctcaggctcgtgtgctcacggacttgaagggtctcagtactgagcatgagatg
gaggcaaatgacgtgccgatgccggagttgcagtacaatgtgcggctgcttgttgaggag
actgaggctgatattgtcaggttggatgggcagctgcggcgggagcaggagaaggttgct
agtttggtgcgggagaaggagaaagcagcaaagcaggaggctttgcagaaacaccagctg
caagttatggaggcaattgcaggtgtgctggagcaggtccgcgtggatgacaccactggt
ttgctcactctgggaggattgcttaagaccttccaggaactgaagctgcgctatgaggag
gagttcaaaatgtgcagcgttgcatgggttgcttgccgattcgcgcatccgctattgatc
cgggtctttcaggggtggcagccgctgcagaatccgtcgtttggcttggaggtcatgtca
tcgtggaaggatctgctgcagggagaccagccatacgacttctcagatgctactgaatca
atggctccatatgcacagctggtcagtgaggtcatcctaccagctgtgaggatatcagga
actaattcatgggaggctagggatccggaaccaatgctccgctttcttgagtcatgggaa
cggttgctgccccctatcgtgcttcattcaatattggagcatgtaatcatgccaaagctc
acagctgcagtcgactcttgggacccgcggagggagaaggtaccaatccatgtatgggtg
cacccatggttgcctactctagggcaaaggatagagacattgtgccactctattcggtac
aagctgagtagcgtcctccatgtatggcaagctcatgattcatcagcttatgctgtgcta
tccccatggaagggtgtatttgatacggcaagttgggaaggcttgatactgcgctatatc
gttcctaaactgcaaatggcactccaggagtttcagatcaacccagcaagccagaagttc
gatcagttcaactgggttatgatttgggcttctgctgtcccggtgcaccatatggtccat
atgttggaagttgatttctttagcaagtggcagcaggtcctctaccactggctgtgctca
ccgaatccggatttcaatgagatcatgaattggtacaagggctggagggggcttttccca
ccagagttacttgccaatgagcgcatacggatgcttctaacgtctggtcttgagatgatg
aaccaagctgcggaaggacttgagttggtgcagccaggggcaagggagaatgtgggcttt
ttgagagcaacagagaagcggcaatttgatgcagcacagcaagcatcgcaccgtgctgtg
ccaggagcagccatgtcagatatgagcttcaaggactctattcaggaatatgcagttgac
caaggtttgctgtttatgcctagggttggcaaattttacaagggcatgccagtgtatgaa
ttcggcacagtgagtgtttgcatagattccgccaagcgactactctatgcgcaactacaa
gagggagctgaacggtggagttctgtgtctcttacgcaattgctggaaatgaacaggatg
gcgagaccacgctag
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