Lolium rigidum (rigid ryegrass): 124653054
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Entry
124653054 CDS
T09103
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124653054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124653054
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124653054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Colicin_E5
Motif
Other DBs
NCBI-GeneID:
124653054
NCBI-ProteinID:
XP_047048065
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Position
5:complement(20362285..20368939)
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AA seq
793 aa
AA seq
DB search
MITGGQSYVAAPPAFSADGRLLLVCSGRSVSVFSTSTGMLVSELEGHEADVTAVVVVPPP
ASVAKLATYCWTAGLDGDLICWDFAAAELVRKVHVGLPVHSMVIPNITRTVKSTEVHTPL
AFVSVEDTSKAADKKKALRGQVRIYDLTKGRQVGCLLAETRKPEKIVASVSGEFLGIANK
RQLYIWSVPTEGFKPEKIRKIKLSHTKNLTTLAFHPTERIVAGGDSTGRILIWRAFGKAK
FSGTAGAADDDRDGVRGQDDADTCTTLHWHSSEVKFLKFASDGAYLFSGGMEGVIVVWHL
DSGKRRYKPRLGSPLMFFVDSPDSSISCVSCTSNQVHLLKMPNMEVLKTISGIKLPIASP
DLRRRDVCEFDCTNGLVAIPTEDYCIQFYSLFENTEVSEVQVCERNFQPVDDITMSISLV
SLSIGGEFMCTVDVKLPEEELGGLITLKFWNHGSRAGQFHLSTVIYEPHSDAGISAIAFR
PGKNMAVSSSFGGNFKVWVQSSSLQSREGKSQSGWRCQSVGSYKKKPMTAAAFSGDGSVL
AVAAESVITLWDPDNNALVGVIAEALSPITKLSFIGTSTYLMSLSQSSIPQVAVWNASNL
SMQWSYTLSAEAACCSSNKSEFAVLSLLSCHEGGTPAEQDGVILLFDAENSSPVSSFSVK
KAKGGSIAFVKDDSSMDADTNATRGEEASLLVYVNGSHEYVIFDPRNNEVSQISKHTQKN
IQADEPARIGYASIYGELPKLELKKEVSDIPFIPSERPWETIFTGSSHVLPPLTKLCSAF
LASLLEKRPVSNE
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccggtggacagagctacgtcgcggcgccgccggccttctccgccgacggccgc
ctcctcctcgtctgctccggccgctccgtctccgtcttcagcacctccaccggcatgctg
gtgtcggagctggaggggcacgaggcggacgtcacggccgtcgtggtggtgccgccgcca
gccagcgtcgccaagctcgccacctactgctggacggcggggctcgacggggacctcatc
tgctgggacttcgcggcggccgagctcgtgcgcaaggtccacgtcggcctcccggtccac
tccatggtgattcccaacataaccaggacagtgaaatcaacagaggtgcacacccctctc
gcattcgtctccgtggaagacacgagcaaggcagccgataagaagaaagcgttgcgcggg
caggtcaggatctatgacttgaccaaagggcgccaagtgggctgtctactggctgagacg
cgcaagccagagaagattgtcgcgagcgtttccggggaatttctgggcattgcgaacaag
aggcagctctacatatggagcgtacccacggagggtttcaagcccgagaagatcaggaaa
attaagctttctcacacgaagaacctgaccacgctggccttccatccaactgagaggatt
gtggctggcggtgactccacggggaggatcttgatttggagagcttttgggaaggcgaag
ttttctggaactgctggcgcggcagatgatgatagggatggcgtgaggggtcaggacgat
gcagatacttgcactacgttgcattggcattctagcgaagtgaagttcctcaaatttgct
tcggatggggcttacttgttctcaggtggtatggagggggttattgttgtatggcacctt
gatagtgggaagagaaggtacaagccacgtctaggatctcctcttatgttctttgtagat
tctccagactcttccatttcctgtgtgtcatgtacaagtaaccaagttcatcttctgaaa
atgccgaatatggaggtcctgaagaccatttctggaattaagcttcctattgcttcgcca
gacctacgtagacgagatgtgtgtgaatttgattgcactaatggccttgttgctatacca
acggaagattactgcatacagttctacagtttgtttgaaaacactgaggtttcagaggtg
caagtttgtgagaggaactttcagcctgttgatgatattacgatgtccatttccttagtt
tcattgtccattggtggtgagtttatgtgcactgtggatgtcaagcttcctgaagaagaa
ttaggtggccttattacactaaaattttggaaccatgggtctcgtgccggacagtttcat
ttgtccactgtcatttatgagcctcacagtgatgctgggatctctgctattgctttccgc
ccaggaaaaaacatggctgtgagctcctcttttggcggcaacttcaaggtatgggtccaa
agttcgtctttacaatcaagagagggaaaaagtcaatctggttggaggtgccaatcagtt
ggctcatacaagaagaaacctatgacagctgcagccttctcaggcgatggatctgttctt
gctgttgcagctgagagcgtcattacattgtgggaccctgataataatgcacttgttggt
gtgattgcagaagcactatcgcccattaccaaactttctttcattggcacgtcgacatat
ttgatgtcgctatctcagagttcaataccacaggttgcagtgtggaatgcgtcaaatctt
tccatgcagtggtcttacaccctttctgcagaagctgcatgttgttcgtccaataagagt
gaatttgcggttctttctcttctaagctgccatgaaggaggaacaccagcagagcaagat
ggtgtaatactgttatttgatgcagaaaattcgagcccggtgtcgtccttttctgtaaag
aaggctaaaggcggtagcattgcttttgtgaaggatgattcctcgatggatgcagacacc
aatgccactagaggtgaagaagcttcattgctggtttatgtgaatggttcacacgagtat
gttatctttgatccccggaacaatgaggtgtcacaaattagcaagcacacacagaaaaat
atccaagccgatgaacctgcacgaatcggttatgcttctatctacggagagcttccaaaa
ctggagctgaagaaagaggtttcggatattccatttatcccgtcagagagaccttgggaa
actatattcaccggatcatctcatgttcttccgcctctcacgaaactatgttctgctttc
ttggcatcattgctggagaagagacctgtctcaaacgagtga
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