Lolium rigidum (rigid ryegrass): 124653090
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Entry
124653090 CDS
T09103
Name
(RefSeq) cellulose synthase-like protein D4
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00520
Amino sugar and nucleotide sugar metabolism
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
124653090
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lrd01003
]
124653090
Enzymes [BR:
lrd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
124653090
Glycosyltransferases [BR:
lrd01003
]
Polysaccharide
Structural polysaccharide
124653090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Glyco_tranf_2_3
zf-UDP
Motif
Other DBs
NCBI-GeneID:
124653090
NCBI-ProteinID:
XP_047048099
LinkDB
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Position
5:complement(64659181..64663001)
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AA seq
1201 aa
AA seq
DB search
MSRRLSLPAGSPVTVTVSPRGGKAAAAGGGSPGDGVVRRSSGITSPVSRHSIGSSTATLQ
VSPVRRSGAGGSRYASRDAAADGSAEFVHYTVHIPPTPDRTTTTASAAASKEDAPAAAQR
SYVSATIFTGGLNCATRGHVLTPAGADGAGAAASANLSCKMRGCDMPASLRPPCECGFMI
CHECYADCAAASANCPGCKEPYSAGSDTDDSVDEEEEDDEAVSSSEERDRMPMTSVAKRF
SLVHSVKMPMASTNGKPAEFDHARWLFETKGTYGYGNALWPKNGHGAAGATTGFVGIEEP
PNFGGSCRRPLTRKTSVSQAILSPYRMLIAIRLVALGFFLSWRIRHPNPDAMWLWALSVT
CEVWFAFSWLLDSLPKLCPVNRACDLDVLADRFERPTARNPKGRSDLPGVDVFVSTADPD
KEPPLVTANTILSILAADYPVEKLACYLSDDGGALLTFEALAETASFARTWVPFCRKHGV
EPRCPEAYFGQKRDFLRNKVRLDFVRERRKVKREYDEFKVRVNSLTEAIRRRSDAYNAGE
ELRARRRQQEDAVAAGDALGTAPLAETGAVKATWMSDGSQWHGTWLTGAKDHSRGDHAGI
IQAMLAPPTSEPVLGGEPAESGALIDTTGVDIRLPMLVYVSREKRPGYDHNKKAGAMNAL
VRTSAIMSNGPFILNLDCDHYVHNSAALREGMCYMLDRGGDRICYVQFPQRFEGIDPNDR
YANHNLVFFDVAMRAMDGLQGPMYVGTGCIFRRTALYGFSPPRATEHHGWLGRKKIKLFL
RKKPSMGKKTDRESEHESMLPPMEDDDHNQLSDIESSTLMPKRFGSSGMFVSSIPVAEYQ
GRLLQDMPGVHQGRPAGALAVPREPLDAATVGEAISVISCFYEQKTEWGRRIGWIYGSVT
EDVVTGYRMHNRGWRSVYCVTRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNAMF
ATRRMKLLQRIAYFNVGMYPFTSMFLIVYCVLPAVSLFTGKFIVQHLDATFLVFLLVITI
TLCLLALLEIKWSGITLHEWWRNEQFWVIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKP
GGAEDGEEETFAELYEVRWSFLMVPPVTIMMLNAVAMAVATARTVYSEFPQWSKLLGGAF
FSFWVLCHLYPFAKGLLGRRGRVPTIVFVWSGLICMIVSLLWVYISPPAGAREGIGGFSF
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggctgtcgttgccggcgggctcgccggtgacggttaccgtgtcgccgcgg
ggagggaaggccgctgctgccggtggcgggagccccggggatggggtggtgaggaggtct
tccgggatcacgagcccggtctccaggcactcgatcggctcctccacggccacgctgcag
gtctcccccgtgcgccggagcggcgccgggggcagccggtacgcgtccagggacgccgcc
gcggacgggagcgccgagttcgtgcactacaccgtgcacatcccgcccacgccggacagg
acgaccaccacggcgtccgccgccgcgtccaaggaggacgcgcccgcggcggcgcagcgg
agctacgtctccgccaccatcttcaccggcgggctcaactgcgccacgcggggccacgtg
ctcacccccgccggcgccgacggagccggcgccgccgcgtccgcgaacctgtcgtgcaag
atgcgcggctgcgacatgccggcgtcgctccgcccgccctgcgagtgcggcttcatgatc
tgccacgagtgctacgcggactgcgccgccgccagcgccaactgcccgggctgcaaggag
ccctactccgccgggagcgacacggacgactccgtcgacgaggaggaggaggacgacgag
gcggtgtcgtcgtcggaggagcgggaccggatgcccatgacctccgtggcgaaacggttc
tccttggtgcactccgtcaagatgcccatggccagcaccaacggcaagcccgcggagttc
gaccacgcgcgctggctcttcgagaccaagggcacctacggctacggcaacgccctctgg
cccaagaacggccacggcgccgccggggccaccaccggcttcgtcggcatcgaggagccg
cccaacttcggcggcagctgccgccgcccactcacgaggaaaaccagcgtctcccaggcc
atcctcagcccttacaggatgctgatcgcgatccggctggtggcgctggggttcttcctg
tcatggcgcatccggcacccgaacccggacgcgatgtggctgtgggcgctgtcggtgacg
tgcgaggtgtggttcgccttctcctggctgctcgacagcctccccaagctctgcccggtg
aaccgcgcctgcgacctcgacgtcctcgccgaccgcttcgagcgccccacggcgcgcaac
cccaagggccgctccgacctgcccggcgtcgacgtcttcgtctccaccgccgacccggac
aaggagccgccgctcgtcaccgccaacaccatcctctccatcctcgccgccgactacccg
gtcgagaagctcgcctgctacctgtccgacgacggcggcgcgctcctcaccttcgaggcg
ctcgccgagaccgccagcttcgcgcgcacctgggtgccattctgccggaagcacggcgtc
gagccgcgctgccccgaggcctactttggccagaagcgggacttcctcaggaacaaggtg
cgcctggacttcgtccgagagaggaggaaggtgaagcgggagtacgacgagttcaaggtg
cgcgtcaactcgctcacggaggccatccgtcgccgctctgacgcgtacaacgccggcgag
gagctgcgcgccaggaggaggcagcaagaggacgccgtagcggccggtgacgcgctcgga
acggctccgttggcagagactggggcagtgaaggcgacatggatgtctgacggttcccag
tggcacggcacttggctcaccggcgccaaggaccactctcgcggtgaccacgcaggcatc
attcaggcaatgcttgcgccgccgacgtccgagccggtgcttggcggcgagccagcggag
tccggcgcgctgatcgacactaccggcgtggacatccgtctgcctatgctggtgtacgtt
tcgcgcgagaagaggccagggtacgaccacaacaagaaggccggcgccatgaacgcgctg
gtgcggacgagcgccatcatgtccaacgggcccttcatcctcaacctggactgcgaccac
tacgtgcacaactcggcggcgctccgggaagggatgtgctacatgctcgaccgcggcggc
gaccgcatctgctacgtgcagttcccgcagcggttcgaggggatcgaccccaacgaccgg
tacgccaaccacaacctggtcttcttcgacgtggccatgcgcgccatggacgggctgcag
ggccccatgtacgtcggcacgggctgcatcttccgccgcaccgcgctgtacgggttcagc
ccgccgcgcgccacggagcaccacggctggctcgggaggaagaagatcaagctgttcctg
aggaagaaacccagcatggggaagaagacggacagggagagcgagcacgagtccatgctg
ccgcccatggaggacgacgaccacaaccagctcagcgacatcgagtcatccacgctgatg
cccaagcggttcggcagctcggggatgttcgtgtcatcgatcccggtggcggagtaccaa
gggcggctgctgcaggacatgccaggggtgcaccagggccgccccgccggcgcgctggcc
gtgccacgcgagccgctggacgccgcgacggtcggcgaggccatcagcgtgatctcctgc
ttctacgagcagaagacggagtgggggcggcgcatcgggtggatctacgggtccgtgaca
gaggacgtggtcaccgggtaccggatgcacaaccgcgggtggcggtcggtgtactgcgtc
acccgccgcgacgcgttccggggcacggcgccgatcaacctcaccgaccgtctccaccag
gtgctccggtgggcgacggggtccgtggagatcttcttctcccgcaacaacgccatgttc
gccactcggcggatgaagctcctgcagcgcatcgcctacttcaacgtgggcatgtacccg
ttcacgtcaatgttcctcatcgtctactgcgtcctcccggccgtgtccctcttcaccggc
aagttcatcgtccagcacctcgacgccaccttccttgtcttcctgctcgtcatcaccatc
acgctctgcctgctggcgctgctggagatcaagtggtccgggatcacgctgcatgagtgg
tggcgcaacgagcagttctgggtcatcggcggcaccagcgcgcacccggccgcagtgctg
cagggcctcctcaaggtgatcgccggggttgacatctccttcacgctcacgtccaagccg
ggcggcgccgaagacggcgaggaggagacgttcgcggagctgtacgaggtgcggtggagc
ttcctgatggtgccccccgtgaccatcatgatgctgaacgcggtggccatggccgtggcg
acggcgcggacagtgtacagcgagttcccgcagtggagcaagctgctgggcggcgcattc
ttcagcttctgggtgctctgccacctctaccccttcgccaagggcctcctgggacgccgc
ggccgcgtgccgaccatcgtcttcgtctggtctgggctcatctgcatgatcgtgtcgctg
ctctgggtctacatcagcccgcccgccggcgccagggagggcatcggtggattcagcttc
ccctag
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