Lolium rigidum (rigid ryegrass): 124653217
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Entry
124653217 CDS
T09103
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03020
RNA polymerase
lrd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124653217
09124 Replication and repair
03420 Nucleotide excision repair
124653217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124653217
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124653217
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124653217
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124653217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
HBM
PspAA
DUF7718
DUF7219
Glyco_transf_99
Motif
Other DBs
NCBI-GeneID:
124653217
NCBI-ProteinID:
XP_047048240
LinkDB
All DBs
Position
5:complement(231219732..231223725)
Genome browser
AA seq
120 aa
AA seq
DB search
MNAPDRYERFVVPEGTKKVSFEKDTKIMNAASFTIEREDHTVGNILRMQLHRDPNVLFAG
YKLPHPLQYKVIVRIHTASQSSPTQAYTQAINDLDKELENLKQAFEDEKNRHEERMKQGY
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcccctgatcgctatgagcgcttcgtcgtgcctgagggcacaaagaaggtgtca
tttgagaaggatacgaagatcatgaatgctgcatcgttcaccattgaacgcgaggaccat
actgtcggcaacatcctccgcatgcagctacacagggacccaaatgttctctttgctggc
tataagctccctcacccccttcagtacaaagtcattgttaggatccatactgcaagccag
tcctccccaacgcaggcatatacccaggcaatcaatgatctagacaaggagcttgagaac
cttaagcaggcttttgaggacgagaagaaccgtcacgaggaaaggatgaagcagggctac
tag
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