Lolium rigidum (rigid ryegrass): 124653223
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Entry
124653223 CDS
T09103
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124653223
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124653223
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
124653223
NCBI-ProteinID:
XP_047048245
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Position
5:186896380..186901840
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AA seq
596 aa
AA seq
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MLIQFILRIPITKIRNQPPVSTPPTGLVLSTKTSAAASGQQAAMAIECLVLGAGQEVGKS
CVVVTIGGKRIMFDCGMHMGHHDCQRYPDLARILSATPGATDFTSAISCVVITHFHLDHI
GALPYFTEVCGYNGPVYMTYPTKALAPLMLEDYRKVMVDHRGEEEQYSYEDIQRCMKKVI
PVDLKQTIQVDRDLVIRAYYAGHVLGAAMIYAKVGDAAMVYTGDYNMTPDRHLGAAQIDR
LKLDLLITESTYAKTVRDSKHAREREFLKAVHKCVSGGGKVLIPAFALGRAQELCILLDD
YWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKIKDSYTVHNPFDFKHVCHFERSFVN
NPGPCVLFATPGMISGGFSLEVFKRWAPSEKNLVTLPGYCVAGTIGHKLMSGKPTKIDLD
KDTHVDVRCQIHQLSFSPHTDSKGIMDLTEFLSPSHVILVHGEKPQMAFLKDRIESELGM
PCYYPANNETVSIPTTHYLKINATEKFITSCTAAQARDGLEKANLLCGNHLSGVDGDEKA
DEGILLMEKSRAPKILCEDELLQLLGTERHSVKFEPLLSSRIEEAETTIVDDVASE
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgctaattcaatttatacttcgaatacccatcacgaaaatccgcaatcagccccctgta
tccacacctccgactggcttagtcctgtccaccaaaacatctgctgcggctagcggccag
caggcagccatggccatcgagtgcctcgtgctaggggcggggcaggaggtggggaagagc
tgcgtggtggtcaccatcggcgggaagcgcatcatgttcgactgtggcatgcacatgggc
caccacgactgccagcggtatccggacctcgcgcgcatcctttccgccactccaggcgcc
accgacttcacctctgccatctcttgtgtggtcatcacacacttccatttggaccatatt
ggggcgctgccgtatttcactgaggtctgcgggtacaatggtccagtctacatgacgtac
ccaacaaaggctttagctccattgatgctggaagattataggaaagtaatggtagatcac
agaggagaggaagaacaatatagctatgaagatattcagcgttgtatgaagaaagtcata
cctgtggacttgaagcaaaccattcaagtagatagagaccttgtgatccgtgcctattat
gctggacatgttctaggggctgcaatgatctatgcaaaagttggagatgctgccatggtc
tacacgggggattacaacatgacaccagacagacatcttggagcagcacaaatcgatcgt
ctgaagttggacctcttaataacagagtctacatacgctaaaactgtacgtgactcaaag
catgctcgagagagggagttcttaaaagcggtccataaatgtgtttctggaggaggtaaa
gttctgattccggcatttgctttgggaagagctcaggaactatgcatattactggatgac
tattgggaaaggatgaacttgaagattcctatctatttctcagctggtttaaccattcaa
gctaacatgtactataagatgcttattggatggactagccaaaagatcaaggacagctac
acagttcacaacccgtttgacttcaagcatgtttgccactttgagcgttcattcgtcaac
aatccaggaccctgtgtactttttgcaacacctggtatgattagtggtggattttcactt
gaggtgtttaagagatgggctccatcagaaaaaaatctggttacacttccaggatattgt
gttgccggaaccattggccataaattgatgtctggaaaacctaccaagattgatttggac
aaggatacccatgttgatgtcagatgtcagatccatcagttgtcattcagtcctcacacg
gactccaaagggatcatggatcttacagagtttctttcacccagccatgtgattctcgtt
catggtgaaaagcctcagatggccttcttgaaggacaggattgaatccgaattggggatg
ccatgctattacccggccaacaatgaaacggtctccattccgacaactcactatctgaaa
ataaacgccacggagaagttcatcacgagctgcactgctgctcaggctagagatggtctg
gagaaggcaaacctgctctgtggcaaccatctgtcaggagtcgacggtgatgagaaggca
gatgagggcattcttctaatggagaagtctagggcaccgaaaatcttgtgcgaggatgag
ctccttcagttgctgggcacagagcgccattctgtcaaatttgaaccgctgcttagctcg
aggattgaagaggcagaaaccactattgtagatgatgtagccagtgagtga
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