Lolium rigidum (rigid ryegrass): 124653240
Help
Entry
124653240 CDS
T09103
Name
(RefSeq) diaminopimelate epimerase, chloroplastic
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00300
Lysine biosynthesis
lrd00470
D-Amino acid metabolism
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
lrd01230
Biosynthesis of amino acids
Module
lrd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
124653240
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
124653240
Enzymes [BR:
lrd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
124653240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-GeneID:
124653240
NCBI-ProteinID:
XP_047048260
LinkDB
All DBs
Position
5:60813405..60819319
Genome browser
AA seq
308 aa
AA seq
DB search
MAVSAPRSAAAASFLERRESERALHFVKYQGLGNDFIMVDNRDSAVPKVTPEEAAKMCDR
NFGIGADGVIFVMPGVNGADYTMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGTHSFK
IHTGAGLIIPEIQNDGKVKVDMGQPILNGPDVPTKLSSTKNEAVVQAEMVIDGLTWYVTC
VSMGNPHCVTFGAKELKDLHVDDWNLSDVGPKFEHHDMFPARTNTEFVQVLSRSHLKMRV
WERGAGATLACGTGACAVVVAAVLEGRAERKCVVDLPGGPLEIEWREDNNHVYMTGPAEA
VFYGSFVH
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtccgctcccaggtcggcggccgccgcctcgttcctcgagcgtcgggagtcc
gagcgcgcgctccacttcgtcaagtaccagggcctcggcaacgacttcatcatggtggac
aacagggactcggctgtgcccaaggtgacgccggaggaggcggctaagatgtgcgaccgg
aacttcggtatcggtgctgacggcgtcatcttcgtcatgcccggggtcaatggtgcagac
tacactatgaggattttcaactctgacggtagtgagccggagatgtgtggtaatggagtt
cgttgcttcgctcgttttatagctgagcttgaaaatctacaaggaacacatagctttaaa
attcatactggtgctggattaatcattcctgaaatacaaaatgatggcaaggtgaaggta
gatatgggtcagcctatccttaatggaccagatgttcccacaaaactgtcatctaccaag
aacgaagctgttgttcaagctgaaatggtaattgatgggttaacatggtatgtaacctgt
gttagcatgggcaatcctcactgtgtcacatttggtgcgaaagagctaaaggatctgcat
gttgatgattggaatcttagtgacgttggacctaaatttgagcatcatgatatgtttcct
gctcggaccaacacagaatttgtacaggtcttgtctcgctcacacctcaaaatgcgagtt
tgggagcgtggtgctggagcaactcttgcttgtgggactggtgcttgtgcggttgttgtt
gcagctgttcttgagggccgagctgaacggaaatgtgtagttgatttgcctggtgggcca
ttggaaattgagtggagagaggacaacaatcatgtttacatgactggtcctgccgaggct
gtcttttatggatcctttgttcactag
DBGET
integrated database retrieval system
