Lolium rigidum (rigid ryegrass): 124653333
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Entry
124653333 CDS
T09103
Name
(RefSeq) vacuolar protein sorting-associated protein 60.1-like
KO
K12198
charged multivesicular body protein 5
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124653333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124653333
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
124653333
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
CCDC160
DUF948
PUMA_CC
COG6_N
SOAR
Decapeptide
YjdP
VirB4_TrbE_N
COG4_N
HH_EMRA
HHO5_N
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
124653333
NCBI-ProteinID:
XP_047048356
LinkDB
All DBs
Position
5:complement(165045812..165051094)
Genome browser
AA seq
228 aa
AA seq
DB search
MKKIFGAKKSKEPAPTIQDATNQINKRGESVDEKIRKLDEELARYKEEIRRTRPGPSQEA
IKARAIRLLKHKRMYEEQRNMLYNQTYNLDQVGFAADGLKDAQQTMNAMKAANKELKGMM
KTVKIEDIDNMQDEMTDLMDVSNEVQESLGRSYNIPDDVDEEELMGELDGLEADMEFESA
AVPSYLEPDEEADLNLPAAPTYPTAVPVNRHQEDELGLPAVPRASLRS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatcttcggcgccaagaagagcaaggaaccggcccccaccatccaggacgcc
acaaaccaaataaacaagaggggggagagcgtggacgagaagatcaggaagctggacgag
gagctggccaggtacaaggaggagatccgccggacccggccggggccctcgcaggaggcc
atcaaggcccgcgccatcaggctactcaagcacaagcgcatgtacgaagagcagcgcaac
atgctctacaaccagacctacaacctcgaccaggtcggcttcgccgccgacggcctcaag
gacgcccagcagactatgaatgctatgaaggccgcaaacaaggagcttaaggggatgatg
aaaaccgtcaagatcgaggatatcgataatatgcaagatgaaatgacggatctcatggat
gtgagcaacgaagtacaagaatctctcggtagaagctacaacatccccgatgatgttgat
gaggaagagctaatgggagagctggatggtctggaagctgatatggagtttgagtctgct
gcagtcccgtcatatcttgagccagacgaggaagctgatcttaacttgcccgctgcaccg
acttatcctacagcagttccagtaaacaggcaccaggaggatgaactaggactgccagcg
gtacctcgagcatcactccgtagttag
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