Lolium rigidum (rigid ryegrass): 124653446
Help
Entry
124653446 CDS
T09103
Name
(RefSeq) histone-binding protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03082
ATP-dependent chromatin remodeling
lrd03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124653446
03083 Polycomb repressive complex
124653446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124653446
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
124653446
Histone modification proteins
HAT complexes
HATB complex
124653446
HDAC complexes
Sin3A-HDAC complex
124653446
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
124653446
PRC2.2
124653446
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
124653446
Heterochromatin formation proteins
Other heterochromatin formation proteins
124653446
Chromatin remodeling factors
NuRD complex
124653446
NuRF complex
124653446
NuRF complex (fruit fly)
124653446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
CAF1C_H4-bd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD_LRWD1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
124653446
NCBI-ProteinID:
XP_047048468
LinkDB
All DBs
Position
5:255305390..255309673
Genome browser
AA seq
400 aa
AA seq
DB search
MDSGSSFPAAAAAAAMETEEHLNWQKNAPVLYDLVISHPLEWPSLTVQWLPSGSPAAARS
HQLVLGTHAEDAPNHLMLVDAVLPLPPRLAAAAAAEGAALPAPSVSVFRSAPHQGEVNRA
RCMPQRPYTVATKTCVDEVHVYHLADDGHKAGADVVLRGHGAEGYGLAWSPMKEGWLLSG
SYDKKICLWDLKSGSGAPVLDAQQVFEAHEDMVEDVAWHLKDDNLFGSVGDDCKLMIWDL
RTNKAEQSVVAHQKEVNSLSFNPFNEWILATASGDATIKLFDLRKLSRSLHTFDSHEGEV
FQVEWNPNSETVLASHAADKRVMIWDVSRIGDEQAEEDASDGPPELLFVHGGHTAKISEL
SWNPSEKWVVASVAEDNVLQIWEMAESIYSDDSNASSLST
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggctcctccttcccggccgccgccgccgccgccgcgatggagacggaggag
cacctgaactggcagaagaacgcgccggtgctctacgacctcgtcatctcccacccgctg
gagtggccctcgctcaccgtccagtggctcccgtcggggtccccggccgccgcccgctcc
caccagctcgtcctcggcacccacgccgaggacgcccccaaccacctcatgctcgtggac
gccgtcctcccgcttcccccacgcctggccgccgcggcggccgccgagggcgccgccctc
cctgccccctccgtgtccgtcttccgctcggcaccgcaccagggcgaggtcaaccgcgcc
cggtgcatgccgcagcggccctataccgtggccaccaagacctgcgtcgacgaggtgcac
gtgtaccacctcgccgacgacggccacaaggccggcgccgatgtcgtgctcaggggccat
ggcgccgaggggtacgggctggcgtggagcccgatgaaggaggggtggctgctgagcggc
tcgtacgataagaagatctgcctgtgggatctcaagtccgggagtggagccccggttctg
gatgcgcaacaggtgttcgaggctcacgaggatatggttgaagatgtagcttggcacctg
aaagacgacaacctatttggttctgttggcgatgactgcaagctcatgatttgggacttg
cgtacgaacaaagcagaacaatctgtagtagcacaccagaaggaagttaactccttgtcc
ttcaatccattcaacgaatggatcttggctacagcatctggcgatgcaactattaagctg
tttgacttgcgaaagctatcaagaagcttgcatacattcgacagccatgagggggaggtt
ttccaggttgagtggaatccgaactcggagactgtattggcttcccatgctgcagacaaa
agggtgatgatatgggacgttagcaggatcggagatgagcaggcggaggaagatgcaagc
gatggaccaccggagctgctcttcgtccacggtggtcacacagcgaagatctcggaactg
tcctggaaccctagcgagaaatgggttgtggccagcgtggcggaggataacgtgctgcag
atctgggagatggcagagagcatatactccgatgacagcaacgcctcctccctgtccaca
taa
DBGET
integrated database retrieval system
