Lolium rigidum (rigid ryegrass): 124653528
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Entry
124653528 CDS
T09103
Name
(RefSeq) pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-like isoform X1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124653528
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124653528
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FtsJ
DUF3381
Methyltransf_23
Motif
Other DBs
NCBI-GeneID:
124653528
NCBI-ProteinID:
XP_047048535
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Position
5:258363870..258367186
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AA seq
565 aa
AA seq
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MGDAKQKKKLRPRDKFYHMAKEQGYRSRAAMKLLQLDRSFSFLPTARAVLDLGAAPGGWV
QVAVRSAAIGAVVVGVDLKPIWPIRGARLLREDITATARCSAAVRKFMDSKGVTAFDVVL
HDGDGKNKKRKRGGEEATTTRQSALVIDAVRLATMFLAPKGTFITKFIGPHDFAPVMFCL
QQLFEKVQVAKLEASRSMLPEHYFVCLEYKSPAKIQPELFDLKHLLNASLKNKPRDEVRS
SMETKSRGITMHGSFPSWKAWNAGRASDFIWSEAQTMQELLVSFMGVSFEDPESLPIKNH
ELTTEEIQMFCENLDILDEKTLNHIWEWRMRIRKALSSCSTVIPKPDVTAVDAKVKDDGQ
PVDKTEEFTSIIDTKTREKSESSCRAKDEAHKTPGMQIDATEDAYCGADLASLSFIKHGK
DLRAFDSAEQDMEYGIGDGGQEETQTHEGSNEEVDLDEEQHRYEGMLDEAREGFMIKNNK
VKRQRKHVNPINPYANADLLEKPSEYVVAKKRVHVREPLVNPLMKDNNTGGVGGEEAKCR
RGRAPPERGVFQEKLTRRLDPIMST
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacgcgaaacagaagaaaaagctgcggcccagggacaagttctaccacatggcc
aaggagcaaggttaccggagtcgcgcggccatgaagctgctccagctcgacagaagcttc
agcttcctcccgacggcgcgcgccgtgctcgaccttggggccgcgccgggagggtgggtc
caggtggccgtgagaagcgctgccattggggccgtcgtcgtcggcgtcgacctgaagccc
atctggcccatccgcggcgcgcgcctcctcagggaggacatcaccgccaccgccaggtgc
agcgctgccgtgcgcaagttcatggactccaagggcgtcaccgcgttcgacgtcgttctc
cacgacggagatggaaagaataaaaagagaaagcgcggtggtgaggaggccaccaccacc
aggcagtcagcgctcgtcatcgacgccgtacgcctagcaaccatgttcctcgctcccaaa
ggcaccttcatcaccaagttcattgggcctcatgatttcgcaccagtcatgttctgtctc
caacagctgtttgagaaggtccaggtggctaaacttgaggcaagtcggtccatgttgcct
gaacattattttgtctgtctggaatataaatcccccgcaaagattcaaccagaacttttt
gatctaaagcacttgttaaatgcgagtctaaaaaataagcccagggatgaagttcgtagt
tctatggagaccaaatcaagggggatcactatgcatggaagctttccatcctggaaagct
tggaacgctggtcgagcttcagattttatatggtctgaggcccagacaatgcaagagtta
cttgtttcttttatgggagtttcatttgaggatccagaatctctgcctatcaagaatcat
gagcttacaactgaagagatacaaatgttctgtgaaaatttggatattctggatgaaaaa
accttaaatcatatctgggaatggcgcatgcgcataaggaaagcactgtcttcatgttca
acagtgataccaaagcctgatgttactgcggtggatgctaaggtcaaagatgatggccaa
cctgtagacaaaacggaagaatttacgagcatcattgatacaaagacgagagagaagagt
gaatcaagctgtcgtgcaaaggatgaagcacacaagacaccaggaatgcaaatcgacgct
acagaagatgcttattgcggtgctgacttagcttctcttagttttatcaagcatgggaag
gaccttcgagcttttgattcagcagagcaagatatggaatatggtattggagacggtggg
caggaggaaactcaaactcacgagggctctaatgaggaagtggatttggatgaagaacaa
cataggtacgaggggatgctggatgaagctcgtgagggtttcatgattaaaaacaacaaa
gtaaaacggcaacgcaaacatgtgaatccaatcaatccctatgctaatgcagatttgtta
gagaagcccagtgagtatgtcgttgccaagaagagggtccatgtcagggagccattggtg
aatccactgatgaaggacaataataccggtggggttggcggagaagaggccaaatgccga
aggggaagggcgccgccagaaagaggtgtattccaagaaaagctgacaagaaggctggat
ccaatcatgtcgacatga
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