Lolium rigidum (rigid ryegrass): 124653583
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Entry
124653583 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124653583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124653583
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124653583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYTL1
TFIIA
Motif
Other DBs
NCBI-GeneID:
124653583
NCBI-ProteinID:
XP_047048602
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Position
5:complement(204192651..204197247)
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AA seq
503 aa
AA seq
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MAFSFSSPAQQNPFQTPAPANPFHTPAPANPFQTPAPANPFQTPTSANPFQTPAQAQTPS
PSPSPFQFNFQQPQQQQQQQQQQQQLAASTAQPQQQQQLLTLYTTEGKPAGYSTKWEELH
PESQKALLQIEDKIREYKDESERLDQCSRLHDSSISNVNFELDASRIAQELAGTATVIER
EKASVQELMTVVNEMMWNTEFAIRSYMMLRPRFIKSASGSSPNQPVALAPTSDFYSGIPK
RPSHFMVQTVNKFEKYLDECCKWINELEQLVQIETSKRSSSSVESLPKVMSNVHDYFIYV
ASKVENLHQYVVTMKTEYLHGQRRLGNASDPFLEANRREAAKQEAAARRVHPTLHLPAPV
QPTTQTSASTTSQPQQSLLPAAATSSSTVAAFSMPASAPSTSSLFSTPTTPSLFSTPTTS
LTTNLFGTTGSAQLSTPFGTSSTPTVGSTPAPSGFGTITPSFPSTPAIAGTSLFSTPFGG
GATASGSSFGGTSKGRSKARGRR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctccttctcctcgccggcgcagcagaacccattccagaccccagcgccggcg
aacccgttccataccccagcgccggcgaacccgttccagaccccagcgccggcgaacccg
ttccagaccccaacgtcggcgaacccgttccagacgccggcgcaggcgcagacgccgtcc
ccgtcgccttccccgttccagttcaacttccagcaaccccagcagcagcagcagcaacag
cagcagcagcagcagctggccgcatcgacggcgcagcctcagcagcagcagcagctgctg
acgttgtatacaacggaggggaagcccgccgggtacagcaccaagtgggaggagcttcac
cccgagtcgcagaaggcgctgcttcagatcgaggataaaatacgggagtacaaggatgag
agtgagaggttagaccagtgcagccggcttcacgactcctcaatctcgaatgttaatttt
gagctggatgcaagtcgcattgctcaggagctcgcagggactgccaccgtaattgagaga
gagaaggcatcagttcaagaattaatgactgttgtcaatgaaatgatgtggaacacagaa
tttgctattcgctcatatatgatgttgaggccaaggttcatcaaatcagccagtggttct
tcacccaatcagcctgtggctttggcaccaaccagcgatttctatagtggcatcccaaag
aggccttcccattttatggtacaaactgtaaacaagtttgagaagtatcttgatgaatgc
tgtaaatggattaatgagctagagcagctggttcaaatcgagacaagtaaaagatcatct
tcttctgtggaatctctaccaaaagttatgtccaatgtacatgactatttcatctatgtt
gcttcaaaggtggagaatcttcatcagtatgttgtgacaatgaaaactgagtatcttcat
ggccagcgccgtctgggtaatgcaagtgatccattcctggaggcaaatagaagagaagca
gccaaacaagaagcagctgccagaagggtccatccaacattgcacttgcctgctcctgta
cagcccacaacacaaacttcagcatcaacgacaagccaaccacagcaatctttgctaccg
gctgcagcaacctcctcgagtaccgttgcagcttttagcatgccggcttctgctccatcc
acttcgagtctcttctcgacaccaactactccaagtctcttttcgacacccactacaagt
ctcacgactaacctttttggtacaactgggtcagcccagctgtccacaccatttgggaca
tcctccactcctacagttggatcaacaccagctccgtctggatttgggactatcacccca
tcttttccttcaacgcctgctatagctggaacttcactattttctacgccatttggaggt
ggagctacagcttcagggtccagctttggtggcacatctaaagggaggtcaaaggcccgg
ggccgacgctag
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