Lolium rigidum (rigid ryegrass): 124653597
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Entry
124653597 CDS
T09103
Name
(RefSeq) aladin-like
KO
K14320
aladin
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124653597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124653597
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124653597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EML_2
WD40_Prp19
eIF2A
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
124653597
NCBI-ProteinID:
XP_047048616
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All DBs
Position
5:124511175..124516186
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AA seq
443 aa
AA seq
DB search
MPSFPPPGGVTVCEINRDLVVADSLSEDRAKEAYGDVLGMVFSPIPFQPDDLLTKNEAPV
APDDAEPAESVPRASLVSTVAESLKQMLFPSCDPKLLEEFDTQKVSWNPHKHCLAFVSGK
DQVTVHDFEDSDSKESCILTSEHQKEVKAIEWRPNSGKMIAVGCKGGICLWSASYPGNVP
SVKSGVTSSSFGAFPRGCTGQWILVDVLRGSSTELVSALCWKPDGRYLASASCNGQSFTI
WDVSQGLGTPIRRGLSSISLVRWSPSGDYFLTAKFDGTFHLWETNTWTSEPWSSSNGYVT
GANWDPEGRVALLSFSNSTTLGSVHFSSKPPSLDAHLLPVELPEISSLIVSRGIEKLAWD
ASGERLAVSFKDGNETYHGLLAVYDVRRSPLVSVSLVGFIRGPGEGVKPLAFAFHNKFKQ
GPLLSVCWSSGWCCTYPLILRSH
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcttccctccgccgggcggcgtcaccgtctgcgagatcaaccgcgacctcgtc
gtggcggactccctgtcggaggaccgcgccaaggaggcctacggcgatgtcctggggatg
gtgttcagcccgattccattccagccggatgatctcctgacaaagaatgaggctcctgtt
gctccagacgacgccgagcccgccgagagcgtccccagagcaagcttggtgtccaccgta
gccgagtccctcaagcaaatgctcttcccttcctgcgatccaaaactgctagaagaattt
gatacccagaaagtaagctggaatccacacaagcactgtttagcatttgtatctgggaag
gatcaggttacagtccacgactttgaggattcagatagtaaagaatcttgcattctaact
agtgaacatcaaaaggaagttaaagctatcgaatggaggccaaatagtgggaagatgatt
gcagttggctgcaagggaggcatatgcctctggtcagcatcatatcctgggaatgttcca
tccgtgaaatctggtgtcacctcttcttcctttggtgccttccctagaggttgtactggt
cagtggattctggtggatgttctccgcggttcttctactgagctagttagtgcactttgt
tggaagccggatggaagataccttgcctcggcctcttgtaatggtcagtcgttcacgatt
tgggatgtttctcaagggttgggaactcctattcgacgcggattaagtagtatatcattg
gtgcggtggtcacctagtggagattactttttaactgctaaatttgatggaacttttcac
ttatgggaaaccaacacatggacctcagaaccctggtcttcatccaacggatatgttact
ggggcaaattgggacccagaaggccgtgttgcattgttatccttttctaactcgaccaca
ctaggttcagttcacttctcatcaaagccaccatctttagatgcccatctcctaccagtg
gaacttccagaaatttcctctctgattgttagtcgaggcatagagaaattagcatgggat
gcttcaggagagcgtctggcagtgtcattcaaagatggcaatgaaacgtatcatggactt
cttgctgtgtatgatgtgagaagatccccgcttgtgtccgtttcactggttggattcatc
agaggacctggagaaggagtgaagccgcttgcgttcgccttccacaacaaattcaagcaa
gggccgttgctttctgtgtgctggagcagtggctggtgttgcacataccccctgatactt
cgctcacattaa
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