Lolium rigidum (rigid ryegrass): 124653644
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Entry
124653644 CDS
T09103
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124653644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124653644
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124653644
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
124653644
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
124653644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
BRCT_3
Motif
Other DBs
NCBI-GeneID:
124653644
NCBI-ProteinID:
XP_047048670
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All DBs
Position
5:453277..461877
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AA seq
883 aa
AA seq
DB search
MDGVKILCSGFEKDEREKIEHLVTAMGGLLQAKVSMDVNFVIAKDVLAAKYKWAVNNLKK
PIVTMNWLEQCWIEHRVVPHEPYRILPFTGLCICITKIEADTRKELMEIIEQNGGQYSAT
LTKKCTHLVANEPGGDKYLVAKKWGNIYIVDRRWVDQSVARRVCVDENAYVIRQRSTNYN
GIKSSLQEQRNPEKSSASFQSVPAASVDDSVSTSQYAPVSSAYASKICSTDIAGTPGVEE
TNEMQVDSHVAQDSEAEDDDLYLSNCRISLVGFEEKELSRLVMMIRDGGGSRHVMLSERL
THIILGAPSEEEKKEVRRLAAWGVINVVKVTWLEDCNKTKTEAKVSTAHLANDLLSKEFS
FLGMDKPSATRETKVAKSSCGMFHVPTVNDSHDKQLAKDLSSERKPARDKHANVNNSRAA
TRSAKSSQQNGLSTISKATSSAVNSQSSASSSTFKGRTFCFSNSFSHDRRAEVIDWVRKG
GGTMVDDAQATVADFIIECHGQKGMQCDFSHSTVVSTQWIASCFEVGYLQDVGSHPIFSP
LRCRIPFPGFENFRFCVSQYEDKDRVLLKNLCLTLGAKFTDKATKRVTHLICKFASGPKY
EAYLHKEIPTITVEWLFECVRQDTIIPYDQFQPKPPTSQDRDAGLCTVSQFPTQAANTTS
KIDCPESLSEFQVPRSSSKHSSGSSVSDTTSKIDCPESPSEFQVPRSSSKHSSGSSISKE
KIASPSVHKRRRPETGMANDTSGDNERTEKHVDNSCIPGVADCIEDLLVQSSRDPAPDAT
VVGQEEEPQSVSNFTSPSMENLSNDNWRKKQHIPPAKKVQSRNTAPAPAPTPYLAPFSET
QTESQIIGYEEDWTGMQKIIDRVSSQKKMTDSSGTGHQWDSIK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggatggggttaaaatactctgttcaggcttcgaaaaagatgagagggaaaagatcgaa
cacttagtcactgctatgggaggtcttcttcaggctaaagtgtccatggatgttaacttt
gtgattgcaaaggatgtattggctgccaaatacaaatgggccgtgaataatctgaagaag
cctattgtcactatgaactggttggagcaatgctggatcgaacatcgtgttgtgcctcat
gaaccatacaggattcttccttttactgggttgtgcatatgcatcaccaaaatagaggca
gatacacgtaaggagttgatggaaataatagagcagaatggtggccagtattcagcaact
cttacaaagaagtgcactcatttagttgcaaatgaacctggaggtgacaagtatcttgta
gctaaaaaatggggtaacatttacatcgtggatcggagatgggttgaccaatctgttgct
cgaagagtttgcgtagatgagaatgcctatgtcattcgccagcgttctacgaattataac
ggcataaaaagttccctccaggagcaacgaaacccagagaaaagtagtgcaagttttcaa
tctgttccagcagcatcagttgatgattcagtatcaacatcacagtatgcgccagtctct
tctgcttatgcttcaaaaatctgcagcacggatattgctggcacacctggtgttgaagag
acaaacgaaatgcaggttgatagtcatgtagctcaggactcagaggctgaagatgatgat
ctttacttatcaaattgcagaatttctcttgtgggttttgaggagaaagagttgtcaagg
ttagtcatgatgatacgcgatggtggtggatcccggcatgttatgttaagtgagaggctt
actcatattattctaggtgcaccttcagaggaagagaaaaaggaggtaagacgcctggct
gcttggggtgtgataaatgtggtaaaggtaacatggttagaagactgcaataaaacaaaa
acggaagctaaagtatccacagctcatttggctaacgatttactatcaaaagaattttcg
tttctgggcatggacaaaccatctgctacacgtgagacaaaggtagccaaaagttcatgt
ggaatgtttcatgttccaactgtcaatgattcacatgataagcagcttgcgaaagatctg
tcatctgaaagaaaaccagccagggacaaacatgcaaatgtgaataatagccgagcagca
accaggtctgcaaaatcaagccaacaaaatggattgagcactatcagcaaagcaacttca
tctgcagtgaattctcagagtagcgcttcttcaagtactttcaaagggagaacattttgt
ttctcaaattcattttctcatgatcggagagctgaggttatcgattgggtgagaaaaggg
ggaggcactatggtggatgacgcacaagctactgttgcggatttcataatcgagtgccat
ggacagaaaggcatgcaatgtgacttctctcattcaaccgttgtttcaactcaatggatt
gcctcatgttttgaggtgggctacttgcaagatgttggaagtcatccaatcttctctcct
ttgcgttgtcgcatcccattcccagggtttgagaactttcgtttctgtgtttcacaatat
gaagacaaagatagagttctgctgaagaacctctgccttactctaggagccaaatttaca
gacaaagcaacaaagagagtgactcatcttatctgtaaattcgcaagcggtccaaagtac
gaggcttaccttcataaggaaattccaaccattactgtagagtggctcttcgaatgcgtg
agacaggacacaataataccttatgatcagtttcaaccaaaaccacctacttctcaggac
agggatgctggtctgtgtactgttagtcaatttcctacacaagctgctaatacaacctct
aaaattgactgccccgagtcacttagtgaatttcaagtaccaagaagcagttcaaaacac
agctctggctcctctgtttctgatacaacctctaaaattgactgccctgagtcacctagt
gagtttcaagtaccaagaagcagttcaaaacacagctctggctcctctatttccaaggag
aaaattgcttctccttctgttcacaaaagaagaagacccgaaacgggcatggctaatgat
acatctggcgacaacgaaagaactgagaagcatgtggacaacagctgtattcctggtgtt
gcagattgcatagaggacctactggtccagtcatccagggatcctgcgcctgatgctact
gttgttggtcaagaggaggagcctcaatctgtgtcaaatttcacttccccatccatggaa
aatctttcaaacgacaactggcgaaagaagcaacacatcccccctgccaagaaggtccag
agccgaaacaccgccccggccccagcccccactccctacttggcaccctttagtgagaca
cagacagagtcccagatcataggatacgaagaagattggactggcatgcagaagatcatc
gacagagttagttctcaaaagaagatgactgatagttcaggcacagggcatcaatgggac
tccatcaaatga
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