KEGG   Lolium rigidum (rigid ryegrass): 124654002
Entry
124654002         CDS       T09103                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lrd04121]
    124654002
Enzymes [BR:lrd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124654002
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124654002
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4_4 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-RING_10 zf-rbx1 RING_XB3-XBAT31 zf-RING_6 Prok-RING_4 Zn_ribbon_6 zf-RING_4 zf-Nse Sina_RING TRAF3_RING zf-P11 zf-ANAPC11 zf-FPG_IleRS
Other DBs
NCBI-GeneID: 124654002
NCBI-ProteinID: XP_047049005
LinkDB
Position
5:complement(235773827..235777744)
AA seq 198 aa
MSTVNGVRRVCRRHSQDESADKVVVNLVSPAPGVASRRGVSTTHSGARTSPIDVEALDDE
VQVVSASQVPPRRRNPKIRRQPVTVVDLEVHATREGNKRQKASAVINISPETGEGSSLQS
NKAVKTRKEPAKVAPKEPIFTCPVCWNKLEEPATTMCGHIFCTSCIKQAIQVQKKCPTCR
KYLKINNFHRIYLPNTAG
NT seq 597 nt   +upstreamnt  +downstreamnt
atgagtactgtcaacggcgtacgacgtgtctgcagaaggcactcacaagatgagtctgct
gataaggtcgttgtgaacttggtgtccccagccccaggggtggccagcaggcgtggggta
tccaccactcacagcggcgcacgcacctcgcctatcgatgtggaagctctggacgacgaa
gtgcaggtcgtatcggcttcacaagtgcctcctcggaggaggaatccgaaaattaggaga
cagcccgtgacagtagttgatctagaggtacatgccacccgtgaagggaacaaacgtcaa
aaagcttcggctgtgataaacatctctccagaaacaggggaagggtccagcttgcagtca
aacaaagctgtgaaaactagaaaagagcctgctaaagtggctccaaaggaaccaatcttt
acctgcccagtgtgttggaacaagttggaggagcctgccacaacaatgtgtggccatatc
ttctgcacgagctgcatcaagcaagccatccaggtccaaaagaaatgccccacttgccgg
aagtacttgaagataaacaacttccatcgtatttaccttcctaacactgctggataa

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