Lolium rigidum (rigid ryegrass): 124654235
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Entry
124654235 CDS
T09103
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM-like isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124654235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124654235
Membrane trafficking [BR:
lrd04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
124654235
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
LRR_RI_capping
Motif
Other DBs
NCBI-GeneID:
124654235
NCBI-ProteinID:
XP_047049207
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All DBs
Position
5:230458207..230462974
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AA seq
1405 aa
AA seq
DB search
MDAPPPSSAPRVSMACVLTSEVATVLAIMRRNVRWSGGRYAGDELDHPLIAGLKSLRRAV
ATWDPSRWGDVEPLLYLRPFLDLVRSDEAGAPTTGAALSSLHKILSLDLVGPDAPNVAEA
MAAVVETVTACRFEVTDLASEEAVLARVLQVLLACVRARAAPALSNRHVCDIVSTCFRVV
QQAGTKGELLQRISRQTMHEVVRCVFARLPDIDATAAEDQQIAGSKQQCFSASKMGNGND
SVCLSSSKDEVEGKSGVVQDKAMMELFGVPCMVEILQFLCSLLNIAEDNEVNPRMNAVDF
DEDMPLFALGLINSAIELSSSYIHRHPKLLCFLQDELFRNLMQIGLSISPLILSTVSNII
FTLFYHLRQELKLQLEAFFACVILRLSQSRYGATYQQQEVALETIVEFCRQKEFMAEMYM
NMDCDLQCSNVFEDLVNILSKSAFSVEVTLSPLNVLSLDGLLAVIQAIAQRTGNSPQHCQ
QTVEEMREYFPFWQLKCENINDPNQLVRFVNQQKSIKRKLMVGVEHFNTDKKKGFEYLQG
AHLLPEKLDPRNVALFFRYTPGLDKNLLGDYLGNHDEFSIQVLHEFSKTFDFKELNLDAA
LRLFLETFRLPGESQKIQRILEAFSERYYEQSPKLFVNCDATLVLSYSVILLNTDQHNVR
VKKKMTEEDFIRNNRHINGGNDLPMEFLSEIYYSICKNEIKTIPDQGVGCSEMSFSRWAD
LMFKSKRSSAYIACHSYPFLDHDMFLIMARPTIAAISVILGNVEQEENLARCIDGFLSVA
RLAAFYDLNDVLNDLVVELGKFTIVWNASYDDPVTAFGEDTKARMAAEALFTIATIHGDH
INTGWGTIIDCILRFHKTGLVPARLSNDTADDQEPSSASLPSKISSSYSAASQVMPVSTP
KKTYGLMGRFSQLLYLDTEEPKFQPTEEQLAAQRNASETIKKCQIGTIFTESKFLQADSL
LNLARALIKAAGQRRKISSSIDDEDNAVFCLELIITVALNNRDRIVLLWHDVYEHITHIV
QSTVTPCNLVEKAVFGLLDIVHRLLPYKENLVDDLLRSLQLILKLDARVADAYCENITQE
VTRLVRDNATHIKSQIGWQTIISLLCITARHPDASDACFEALVFIMFEGSHLSPANFVLS
VEASRQFAESRLGSAERSIHALNLMAESMNCLTRWSHEIKEASGDAARMSEGINEMWLRL
IQALRKMCTDQREEVRNHALLLLHRCLVVDGMSVSSSAWLMSFDIVFQLLDEFLDIAQTS
SPKDFRNMEVSLLHAVKLLFKLFLQSLNDLSAQSSFSKLWLEVLDMMEKLMKVKFRGSRT
EKLQEAITEQLKNILLVMKASGILSKKSISGDSSLWEATWLQVSNITPLLQSVIFPGNDG
DDAAQSTQDKLDSPAVSEGRLVSVK
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaccaccaccgtcgtcggcgccacgcgtgtccatggcgtgcgtgctgacgtcg
gaggtcgccacggtgctcgccatcatgcgccgcaacgtccgctggtccggcggccgctac
gccggcgacgagctcgaccaccccctcatcgcggggctcaaatccctccgccgcgccgtc
gccacgtgggacccgagccggtggggggacgtcgagccgctcctctacctccgccccttc
ctggacctcgtccgctccgacgaggccggcgcgcccaccacgggcgccgcgctctcgtcc
ctgcacaagatactctccctcgacctcgttggccccgacgcgcccaacgttgccgaagcc
atggccgccgtcgtggagaccgtcacggcatgccgcttcgaggttactgatctggcgtca
gaggaggccgtcctggctcgggtcttgcaggtgctgctcgcctgcgtccgtgcccgcgcc
gcgccggcgctctccaaccgccacgtctgcgacatcgtcagcacctgcttccgcgtcgtg
cagcaggctggtactaagggagagctgctacagcgtatttcccgccagactatgcacgag
gttgtacgctgtgtcttcgcccgcttgccggacattgatgccaccgcggctgaagaccag
cagattgctggtagcaagcaacaatgtttcagtgctagcaagatggggaatggtaatgat
tctgtgtgcttgagtagttccaaggatgaagtggaaggtaaatctggtgttgtgcaagac
aaagctatgatggagctgtttggggttccttgcatggtagaaatattgcagtttttgtgc
tctcttttgaacatagctgaagacaatgaggtgaacccaaggatgaatgcagttgacttt
gatgaggatatgccactctttgctctggggttgatcaattctgctattgagctatcatct
tcatacatacacagacaccccaaactactatgttttttacaagatgaactgttccgcaat
ctaatgcagatcggcctgtcaatcagccccttgattctatcgacggtatccaacattatt
tttaccctcttctaccatttacgccaggaacttaagcttcaacttgaggctttctttgca
tgtgtgatcctaagactatcccagagtagatatggagctacttatcagcagcaggaagtt
gccttggagactatagtggagttttgccgacagaaagagtttatggctgagatgtatatg
aatatggactgtgatttacagtgctctaatgtttttgaagacctagttaacattctgtct
aaaagtgcattctctgtggaagttactttgtcacctttgaatgtgctatctttggatggt
ttgcttgctgtcattcaggcaatagcacagaggactggcaattcacctcagcactgccag
caaacggtagaagaaatgagagagtattttcctttttggcagttgaagtgtgagaacatt
aatgatcctaatcaattggttagatttgttaaccagcagaaaagcatcaagagaaagctg
atggttggtgttgaacatttcaatacggataaaaagaagggttttgagtatttgcaaggt
gctcatctcttgcctgaaaaacttgatccacgtaatgtcgccctgtttttccgctacaca
cctggattagacaagaatcttcttggggactatctggggaatcatgatgagttctccatt
caggtccttcatgaattctctaaaacctttgacttcaaggagttgaacttggatgctgcc
ctaaggctcttcctggaaaccttccggctgcctggtgaatcacagaagatacaaaggatt
cttgaggccttttctgagaggtactatgagcagtcaccaaaattgtttgttaactgtgat
gccactctggtgctgtcatactcagttatcttgctcaacacggatcaacacaatgtacgg
gttaagaagaagatgaccgaggaagacttcatcaggaacaatcgccatatcaatggtggg
aatgatcttccaatggagttcttgtctgagatatattattctatttgtaaaaatgaaatc
aaaaccattcccgaccaaggagtgggatgttctgagatgtcatttagccgctgggctgat
ctgatgtttaagtcaaagaggtcatcagcttacattgcttgtcactcctacccttttctt
gatcatgacatgtttcttatcatggccaggccaacaattgctgctatctcagtgattttg
ggtaatgttgagcaagaagagaatcttgcgagatgcattgatggttttctgtcagtggct
aggctggctgcattctatgatcttaacgatgtgctgaatgatcttgttgtggaacttggc
aagttcaccattgtgtggaacgcttcctatgatgatcctgtaacagcttttggtgaggat
accaaggctagaatggcagcggaggctcttttcactatagcaactattcatggtgatcac
ataaacacaggatggggaaccataattgattgcattttaagatttcacaagacaggcctt
gttcctgctcgcctctctaacgatacagctgatgatcaggagccctcttctgcttcattg
cctagcaagatttcctcttcatattccgctgcatctcaagtcatgccagtcagcactcct
aagaaaacatatgggctaatggggaggttcagtcaactattgtatttagataccgaagag
ccaaagttccagccaaccgaggagcagcttgctgctcagaggaatgcttcagagaccata
aagaagtgccaaataggtacaatcttcaccgagagcaaattcttacaagctgactcactc
ttgaatctggcaagagccctcattaaggcggctggccaacgtcggaagatctccagctcg
atagatgatgaagacaatgcagtcttctgcttagagctgatcattactgttgcattaaat
aacagagataggattgtccttttatggcatgatgtttatgagcacataactcatattgtt
cagtccacagtgacgccctgcaatcttgtggagaaagctgtttttggcctcctggacatt
gttcatcgtttgcttccttataaggagaatcttgtggatgatttactgaggtcgcttcag
ttaatcttgaaactcgatgctcgtgtggctgatgcttattgcgagaacattacccaggag
gttacacgccttgtcagagacaatgcaacacatatcaagtcccagattggttggcaaact
atcatttccttgctgtgcatcactgctcgccatccagatgcttctgacgcttgttttgaa
gccctagtttttatcatgtttgaaggatcacacctctcacctgcgaactttgtcctttcg
gtggaggcctcaagacagtttgcggagtctcggcttgggtctgcagaaagatctatccat
gctttgaacctaatggcggaatcaatgaactgtcttacacgctggtcacatgagattaag
gaagctagtggagatgcggcaaggatgtcggaaggaattaatgagatgtggctgcggcta
attcaggctctacggaagatgtgcacagatcagagggaagaagtgaggaatcatgctctg
ttattgttgcacagatgcttagtagttgatggaatgtcagtttcatcttcagcatggttg
atgtcatttgacattgttttccagttgctcgatgaatttttagacattgcacagacttcc
tcaccaaaggatttcagaaacatggaggtgtctctcttacatgctgtaaaactgttattc
aaattattcttgcagtcgcttaatgatctttcagcacagagcagtttcagtaagctgtgg
ttggaagtcttggacatgatggagaagctcatgaaagtcaaatttagagggagtaggacc
gagaagctacaagaggccatcacagagcaactcaagaacatactgttggtgatgaaagcg
agtgggatcctatcaaagaaaagcatcagcggggattccagtttgtgggaagcaacatgg
cttcaagttagcaatatcacacctttgcttcagtcagtaattttccctggtaatgatggt
gatgatgcagcacaaagtacacaagacaagttggatagtccagcagtttctgaggggaga
ttagttagcgtcaaatga
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