Lolium rigidum (rigid ryegrass): 124654237
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Entry
124654237 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124654237
KO
K14311
nuclear pore complex protein Nup188
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124654237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124654237
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124654237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RICTOR_M
Motif
Other DBs
NCBI-GeneID:
124654237
NCBI-ProteinID:
XP_047049210
LinkDB
All DBs
Position
1:complement(199508275..199522674)
Genome browser
AA seq
1115 aa
AA seq
DB search
MCGLTEFMPVAPFVTMVLSSSSKPFPFVTATISAMSFQNSALQVAAARALSILCFTAYRV
QPQLMENCTFIIDGSEIWRLQASISHILDKEENINNCLIVAIFNLLTSFVRYQPALFVSL
TEEHARIKADRNNSVNSQISGSSVLSSSRSKSRLIEQILGYVVNSTEFMNRSPSLLLSIL
DLLEALWENGIQFICILDKLRSSRTFWESLSQCICATFDRCLVGSVVTADEKFSSRYNCR
AKFFEIMSHELFLKGRLLVEAKTSNPVPEHTKEQKEPFASCPSNVVLKWFDSVLLEDFVK
HLSSNGYAKELFHRAKVASCVCIIRLIMKLSTGDTASLSFSAVKKVQLFSSKLLQHQAFV
ALLSQYALHGYSGEQELTSLVINDLYYHIHGELEGRQITSGPFQELLCFLLEFKCFERNA
LDQPYRAFPGATDNILFDVAHTRDDLGVELWTHSDWKPEKEVAERMLDIMHKANKMKCDA
DAKLSTLRSFTTFLSVYIGTSSSNKVTLSDGGISTTALEAAIRCACTYFQSTVASLFPEV
DTNEVLYPLLSGQVDLLLTLARFFFNQVKQTKNSARLHPVIVLLMKTSGASTSFLVDLMP
SSPALKKPVKSLLVLILSLFGFIYNKDDIQDVSGDVNLFGESSVISMSLLPVLCKLAENR
DYTDLAVGSMDLLLKGFIPPNVWLPILQKHFRLQAILHKCQNGAIVSIQVILNFLLTLGR
TKDGAKMLQSANIFAFLKVLLSQLSLDDSCFRNSLSSQAKDVNIWGMALAIVASLNHSMD
DDISRNCVANSTISFLSGQVPLMSSYLSAQNVGTHHSKKRAVLQQSQTSLSALGLTENIL
SLLCILAKYHFPHDTSMKEVDSELREIIIHLLAFISRGNAWTGDSPNWNPSFCCPPIVKE
EVTLHEDPPLIRSNHGWFRFAASSTLSTAAVSAPSNAALSIVVRDKSSGDSGSAKQTRFT
EMIAVQIYRIAFLIMKFLCSQAKEAVKRAEELEFVDLAHFPELPMPDILHGLQDQVVSIV
TEVLEANVSSTLVSETDRVCHLLLVILETSLYMELCVSQSCGIRPVLGRFEDFSKGIKAM
LHALEKHSGFKPLVRSLTQITTLLYPGLAQSNFLI
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggcctcactgagtttatgccagttgcaccttttgttactatggttttgtcatct
tcatcaaagccatttccttttgtcacagcaacaatatcggcaatgtcatttcagaattcg
gctttacaagttgctgcagctagagcattatcaatattgtgcttcactgcttacagagtc
caacctcaactcatggaaaattgtacctttattattgatggttcagagatttggagattg
caagctagtatttcccacattcttgacaaggaagagaacattaataattgtttgatcgtg
gctatattcaaccttctgacttcttttgttcgttatcagcctgctctttttgtttcactg
acagaggagcatgcaaggataaaagctgatcgtaataattctgtaaattctcagatcagt
ggttcctctgttctcagcagttcaagaagcaaatctagacttattgagcaaattttagga
tatgttgtgaattccactgagttcatgaatagatctccttctttattacttagtattctt
gacctacttgaggcattatgggaaaatggtatccagttcatatgcatattagataagctc
agaagttctcgaacgttctgggagagcttatcgcagtgtatttgtgctacctttgatcgt
tgtcttgttggcagtgttgttactgctgatgagaaattttcttcaaggtataattgccgg
gctaaattttttgagatcatgtcacatgagttgttcttgaaaggaagattacttgtggaa
gcaaaaacttctaatcctgttccagaacatacgaaggagcagaaagaaccttttgcatct
tgtccaagcaatgttgtgctcaaatggtttgatagtgttcttctggaagattttgtcaaa
catttgtcaagcaacggatacgcgaaggagctttttcatcgtgccaaggtagcttcatgc
gtttgcatcatccgtctaataatgaagttgtccactggtgatactgccagtttgtctttc
tcggcagtgaagaaggtccagctattctctagcaaattgttacaacaccaagcattcgta
gctctgctctcacaatatgcccttcatggctacagtggtgaacaagaacttaccagtttg
gtaatcaatgatctttactatcatatacatggagaactcgaaggtcgtcagattacttct
ggtccctttcaggagctcttgtgttttcttcttgagtttaagtgttttgagcgcaatgct
ctggaccaaccatatagggccttcccaggagctactgacaatattttgtttgatgttgca
cacactcgggatgatcttggagttgaactttggactcattcagattggaaacctgaaaag
gaagtagctgaaagaatgctggatattatgcataaagcaaataagatgaagtgcgatgct
gatgcaaagctttccacattgaggtcctttacaacatttttatctgtctacattggaaca
agttccagtaataaagtcaccttatcggatggagggatttccacaacagctctggaagca
gcaattagatgtgcatgcacatattttcagtcaactgttgcttcgctatttcccgaagtt
gacaccaatgaggttttgtatcccctattgtctgggcaagtggacttactgcttactctt
gccaggttcttttttaaccaagttaagcaaaccaagaactctgctcgtctccatccagtt
attgtacttcttatgaagacctcaggtgccagcacatcatttttggttgatctcatgcca
tctagtcctgctcttaaaaaaccagtgaagtccctccttgttctgattttgtctctattt
ggattcatatacaacaaggatgacatacaagatgtatcaggtgatgttaatctgtttggt
gaatcatctgttataagtatgagtttgttacctgtgctctgcaaattggctgagaatagg
gattatactgatcttgctgttggatcaatggacctactattgaagggctttatacctcct
aatgtatggttgcctattctacaaaagcatttccgtcttcaggctatactgcataaatgt
cagaatggtgcaatagtgtctattcaagtaattttgaatttcctcttgaccttggggcgg
acaaaggatggcgctaaaatgcttcagtctgcaaatatttttgctttcttgaaggtactt
ctgagtcagctgtctctcgatgactcctgtttcagaaattctttgagcagccaagcgaag
gatgtgaatatctggggtatggctcttgcaatagtcgcctctctcaaccattctatggat
gatgatatttctcgcaactgtgttgcaaacagtactatcagcttcctttcaggacaagtt
ccgctgatgtcgtcttatctatctgcacaaaatgtgggtacacatcatagcaagaaaagg
gcagtgttgcaacagtcacagacatcactttcagctctgggtttaactgagaatatcctc
tcactcctgtgtatcttagcaaaatatcattttccacacgacactagtatgaaggaagtg
gattcagaattaagagagattattatccacctgcttgcatttattagcagaggaaatgca
tggactggtgattccccaaactggaacccatctttctgttgccctcctattgttaaagaa
gaagtgacacttcatgaagatccaccactcatcaggagcaatcatggatggttcagattt
gctgcaagcagtactctgtcaactgcagccgtttctgctccttccaatgcagcattatct
atagtggtcagagacaagagtagtggagattctggttctgcgaaacaaactcgctttact
gagatgatagctgtgcagatttacagaatagcttttcttattatgaaattcctgtgcagt
caagccaaggaggcagtaaaaagggcagaagaactagaatttgttgatcttgcacatttt
cctgaacttcccatgccagatattcttcatggtctgcaggatcaagtggtttctattgtt
actgaagtactggaagcaaatgtatcgagcactctcgtcagtgagacagatagggtatgc
catcttctgttggtgatccttgaaacatcactttatatggaactgtgcgtgtcccagtca
tgtggcatcagacccgtacttggtcggtttgaagatttctccaagggaattaaggctatg
cttcatgctttggagaaacattctggttttaaaccattggttaggtcacttactcaaatt
acgacacttctgtatcctgggcttgctcaaagcaacttcctcatctaa
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