KEGG   Lolium rigidum (rigid ryegrass): 124654358
Entry
124654358         CDS       T09103                                 
Name
(RefSeq) protein RDM16-like
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124654358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lrd03041]
    124654358
Spliceosome [BR:lrd03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    124654358
SSDB
Motif
Pfam: PRP3 Prp3_C Fusion_gly
Other DBs
NCBI-GeneID: 124654358
NCBI-ProteinID: XP_047049324
LinkDB
Position
5:156876529..156880502
AA seq 857 aa
MDRDRSSRRDRDRDRDDDRSSRRDRDRDDDRHAARDRDRDEDRHRRRRHDGDGSHHKSRD
AEDDRRHHKRGADDTSAAAVADEDRRRARRRRSRSPSESSPPPAKRDRSSSRAPRDSADP
ADREQQPPPPPSTRKRKEHDSGGRRDGEEPADREGGKRARAAAVDPAPRTEERPRRERRR
FDDGDENGDQKRGRDGSSREHKKVEPGANGDSHGGAAPNVGAQQPLNSAPAVAVPSADPV
ASKVSSITTTNENGGVSIRSDQVTGKSSTDGTPNSAAGRSSNLSLDALAKAKKALQLKKE
LSEKLKRLSGLNNKLGTALSDAQTPKKETQPVSGSSASSGHAGAASELPASIASGMAAAA
AVAAGISGLTNIPNLDAVKRAQELAASMGFRQDPQFAPVINMFPGTSSELAVSQRPAKAP
VLRLDAQGREIDEHGNVISMTKPSSLSTLKVNINKQKKDAFQIIKPDLESLAKSTVHFDE
RMGINPTKLLRPKRPGFIFVEEGKLTRQAELQRIKSQFGDAQAKELKVKQAQLAKAKVEV
DMNPNLIEIAPGGRPPKQKQKEEIPDIEPWDSKILISATYEDDISLEKLNMDRITIYVEH
PEPLEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKVKMSN
LMKVLGAEATQDPTRMEMEIRTAAAEREQAHVDRNIARKLTPAERREKKERKLFDDPNTL
DWIVCVYRIRDLSHPQTRFKVDVNAQENRLTGAAVIADGISVVVVEGGKKSIKRYNKLML
NRIDWAAAVGGEDDAEDEPDKPVNSCALVWQGSVGKRTFTKFSVHQCRSEAAAKKVFADA
SVPHYWDLAVNFSEDSS
NT seq 2574 nt   +upstreamnt  +downstreamnt
atggatcgcgaccgctcctcccgccgggaccgcgaccgcgaccgcgacgacgaccgctcc
tcccgccgcgaccgggaccgcgacgacgaccgccacgccgcccgcgaccgcgaccgcgac
gaggaccgccaccgccgccgccgccacgacggcgacggcagccaccacaagtcgcgcgac
gccgaggacgaccgccgccaccacaagcgcggcgccgacgacacttccgctgctgccgtc
gccgacgaagaccgccgccgcgcgcgcaggcgccgctcgcgctccccctcagagtcgtcc
ccgccccccgcgaagcgcgaccgctcctcgagccgcgcgccgcgggactccgcggacccg
gcggaccgggagcagcagcccccgcccccgccgtcgacgcggaagcggaaggagcacgac
agcgggggccgccgcgacggcgaggagcccgccgaccgggagggtgggaagagggccagg
gccgcggcggtggatccggccccgcggacggaggagaggcccaggcgggagcgcaggagg
ttcgatgacggagatgagaatggtgatcagaagaggggcagggacggttcgtctcgtgag
cacaagaaggtagagcctggtgctaatggagactcacacggcggcgcagcgcctaatgtt
ggtgcacagcagccgcttaattctgcacctgctgttgcggtgccatctgctgatcctgtt
gcttcaaaggtatcctcgattactaccaccaatgaaaatgggggagttagtattagatct
gatcaagttactggaaaatctagtacagatggaactccaaattcagccgctggcagaagt
agtaacttaagtcttgatgctttagccaaagctaaaaaagctttgcaactgaagaaggaa
ctttcagaaaaactcaagaggttatctgggcttaataataaacttggtactgctctttct
gatgcgcaaactcctaagaaagaaacccagcctgtttctggctcaagtgcgtcttcagga
catgctggtgcggcttctgaactgcctgctagtattgcatctgggatggcagcagctgca
gctgttgcagctggtatttcaggccttaccaacattcccaatttggatgctgtgaagcga
gcacaagaacttgctgctagtatgggatttcgccaggatccacagtttgcacctgttatc
aacatgttccctggcacatccagtgaattagctgtttctcaaagacccgccaaggctcct
gttctccgtcttgatgctcaaggtagggaaattgatgagcatgggaatgttatcagcatg
accaagccaagcagtctgagtactctgaaggtcaacattaataagcagaagaaggatgcg
ttccagattatcaaacctgacctggagtcacttgcaaaatctactgttcattttgatgaa
aggatgggcatcaacccaaccaagctccttcgtcctaaaaggccaggattcatatttgtt
gaggaaggcaagcttacgaggcaggctgaattgcagaggattaagagtcaatttggtgat
gcacaagctaaagagcttaaagtaaaacaagctcaacttgctaaggcgaaggtcgaagta
gacatgaatccaaacctaattgaaattgctccgggcggaaggcctccaaagcaaaagcag
aaggaagagattcctgacattgagccatgggactcgaaaattttaatttctgccacgtac
gaggatgacatctctttggaaaagcttaatatggataggataaccatctacgtagaacat
ccagagccattggaaccacctgctgagcctgcaccaccaccgcctcagcctcttaagctg
actaagaaggagcagaagaagctcagaacacagaggcgcctcgcaaaggaaaaagatagg
caagaaatgattaggcaaggcctcttggagccaccaaagcccaaggtcaagatgagcaac
cttatgaaagtactgggtgcagaggctacacaggatccaacacgtatggagatggaaata
cgaacagctgctgcagagcgtgagcaggctcacgtggatcgcaatattgcccgcaaactc
acaccagcagagcgccgtgagaagaaggagaggaagctttttgatgatcctaacacacta
gactggattgtttgtgtgtacagaatcagagacctgtcacaccctcagacacgctttaaa
gttgacgtgaatgctcaagagaaccggctgactggtgctgcagttatcgcagatggtata
agtgttgtggttgtggaaggagggaagaagtcaatcaagaggtacaataagctgatgctg
aaccggattgactgggctgctgcagttggtggcgaggatgacgctgaggacgaaccagac
aagccggtgaatagctgtgcattagtatggcaaggtagtgttgggaagcgcacctttacc
aagttcagtgtgcatcagtgccggagtgaggctgctgccaagaaggtgtttgcagatgct
tctgttccacactactgggacctggctgtcaacttttcggaagattcatcttga

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