Lolium rigidum (rigid ryegrass): 124654372
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Entry
124654372 CDS
T09103
Name
(RefSeq) double-strand break repair protein MRE11-like
KO
K10865
double-strand break repair protein MRE11
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
lrd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124654372
03450 Non-homologous end-joining
124654372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124654372
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124654372
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
124654372
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
124654372
BRCA1-C complex
124654372
NHEJ (non-homologous end-joining)
MRX complex
124654372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
AimR
SPG48
Motif
Other DBs
NCBI-GeneID:
124654372
NCBI-ProteinID:
XP_047049339
LinkDB
All DBs
Position
1:205739988..205746708
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AA seq
541 aa
AA seq
DB search
MEASRKSPKKTKVLDLSAYWFGFLEISFPREAAAVVGRGGGSSTTLRILVATDCHLGYLE
KDELRRSDSFDTFEEIFSLAEQHKVDFVLLGGNLFHENNPSRSTLVKTIEILRRCCLGDR
PVQFQVVSDQATSLQNLFGRVNHGDPNINISLPVFTIHGDHDDPTGVDNMSAIDVLASAG
FVNYFGKVDLGSSDVDEMSLHPILIKKAATAVALYGLGNVRDTRLREMFQTPGAIKWINH
ESPEDMPLSNWFNIMILHQNRRTASPDNGITEYLLPHSLDLVIWGHEHESIADPQEVPGM
GFHITQPGSTITTSLTSAEATQKHVLLLEIKGMKYRPTKIPLKTVRPFEYAEVVLEEQED
VDPNDEWTVHAHLDKVVENLIEKNNRKTGSGSEPKLPLVRIKVDYSGFSTINPHRFGQKY
VGKVANPQDVIVFSKSAKRRQNTQVNTDGSEQIYPTDLDQCTVEDLVAESNVKTQILQVN
DLQTALHVFVKKDDNMAFHSCLQKNTEDAKVRDTSHHQYLRIVESNPGGLYPCYIYYQIV
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtcccgaaaatcacctaagaagaccaaggttcttgatctgtctgcatattgg
tttggatttcttgaaataagttttcccagggaggccgcagcagtagtaggacgaggagga
ggaagcagcaccacgctgcggatactagtggcgaccgactgccacctcggctatctcgag
aaggacgagctacgcaggtccgactccttcgacaccttcgaggagatcttctcactggca
gagcaacataaggtggatttcgtgcttcttggtggcaatctgttccacgagaacaatccg
tcgcgctcgacgctggtgaagacgattgagatcctgaggcgctgctgcctgggtgaccgg
ccggtgcagtttcaggtggtcagtgatcaggcaacaagcctgcagaacttgttcggtcgg
gtgaatcacggagacccaaacatcaacatcagcttgcccgtgttcaccatacatggcgac
catgatgatcctacaggagtggataacatgtccgcaatagatgttcttgcctcggctggt
tttgtgaattattttggaaaggtggatcttggcagttctgatgttgatgaaatgtcactt
catcctatacttatcaaaaaggccgcaacagctgtcgcactatacggcctagggaatgtc
agggatacaagattgagagagatgtttcaaacaccaggtgcaataaagtggattaaccat
gaaagtccagaagatatgccattatctaactggttcaacattatgattcttcatcagaac
aggagaacggcgagtcctgacaatggcatcaccgaatatcttttgccacattctttagac
ttggtaatttggggccacgagcatgaaagcattgcagatccacaggaggttccaggtatg
ggttttcacatcacacaaccaggatctacaattaccacatcactcactagtgccgaagca
acccaaaagcatgtgcttttgttggaaataaagggaatgaaatacaggccaactaaaata
cctttgaagactgttagaccattcgaatatgctgaggttgtgttagaagaacaagaggat
gttgacccgaacgacgaatggacggttcacgcacatttggataaagttgtggaaaatctt
attgagaagaacaatagaaaaacaggcagtggatcagagcccaaacttccacttgttagg
ataaaggtggactactctggattttcgactataaacccgcatcggtttggtcaaaagtat
gttgggaaggtcgcaaatccccaagacgttattgttttctcaaaatcagcgaaaagacgt
caaaatacgcaagtaaacactgatggttctgaacagatttatccaactgaccttgatcag
tgcacagtcgaagatttggttgcagagagtaacgtgaaaacgcagattcttcaagtgaat
gatctgcagactgccctgcatgtttttgtcaaaaaggatgataatatggcgtttcactcc
tgcttgcagaaaaatactgaagatgcgaaagtaagagacacttcacaccaccaatatctt
cgtatagtagagagtaaccctggtggtttatacccttgttatatatactatcagatcgtg
ctttga
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