Lolium rigidum (rigid ryegrass): 124654473
Help
Entry
124654473 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: cullin-associated NEDD8-dissociated protein 1-like
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124654473
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124654473
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
124654473
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124654473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT_EZ
HEAT_2
HEAT_ECM29
HEAT
TOR1L1_N
Cnd1
RIX1
mTOR_dom
IFRD
HEAT_DAAF5
PPP2R1A-like_HEAT
GNC1_N
PMI_typeI_hel
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
124654473
NCBI-ProteinID:
XP_047049425
LinkDB
All DBs
Position
5:38457440..38467636
Genome browser
AA seq
1219 aa
AA seq
DB search
MANMNITGILEKMTGKDKDYRYMATSDLLSELNKESFKADQDLEPKLTNIIIQQLEDASG
DVSGLAVKCLAPLVKKVSEDRVVEMTNKLCDKLLNGKEQHRDTASIGLKTIIVEVTTPSL
AEKILVSLAPQLISGVTSGKSAEIKCECLDILSDVLNRFGNVIAKDHAYMLTALLSQLSS
TQASVXKKSVSCIASLAPCLSDDLLAKATLEVVKLLKNRSAKSEITRTNIQMIGALSRSV
GYRFGPHLAEAVPLLINYCTTASENDEELREYSLQALESFMLRCPRDISPYCEGILNLAL
EYVSYDPNFTDSMEEDTDDEVQDEEDDDESADEYTDDEDASWKVRRASAKCLSAIIVSRP
QTLSKMYQEACPKLIDRFREREENVKMDIFNTFIELLRQTANVTKGQGDIDESSPRWLLK
QEVPKIVKSINRQLREKSIKTKVGAFSVLKELVIVLPDCLADHFGSLVPGIEKALNDKSS
TSNLKIEALAFTRIVMASHSPSVFHPYIQALSSPILSSIGDRYYKVTAEALRVCGELVRV
LRPNFEAHSIDFRPYIGPIYKAILARLANQDQDQEVKECAISCMSLVISTFGDGLQRELP
SCLPILVDRMGNEITRLTAVKAFAVIASSPLRIDLKCVLDHVVSELTAFLRKANRALRQA
TLGTLNSLVVTYGGQIGSSSYETIIAELSTLISDIDLHMAALALELCSTIMVDRRSIQNV
GLAVRQKVLPQALILIRSALLQGQALQALQKFFASLVQSANTSFETLLDSLISTAKPSQS
GGLSKQALSSIAQCVAVLCLAAGDQKCASTIEMLKGILKDDSSANSAKQHMALLCLGEIG
RRKDLSKHVQIENIVIESFQSPFEEIKSAASYALGNIAVGNLSKYLPFILDQIDNQQKKQ
YLLLHSLKEVIARQSVDHTGQSELQDSNIVKILALLFNHCESEEEGVRNVVAECLGKIAL
IEPNRLIPALKERTSSPAANTRATVAIAIKYSIVERPGKIDPIMYSEISTFLMLIKDSDR
HVRRAAVLALSTAAHNKPNLIKALLPELLPLLYDQTVVKPELIRTVDLGPFKHVVDDGLE
LRKAAFECVDTLLDNCLDQVNPSSFIVPFLLSGLGDHYDVKMPCHLILSKLADKCPSAVL
AVLDSLVEPIEKTISHKPKGDAVKQEIDRNEDMIRSALRAIAALSRISGSDYSMKLKNLM
NKITATPSLAEKYNSVRSE
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatatgaacataactggcatcttggagaagatgacagggaaagataaagactac
agatatatggcgacgtcagatctgcttagtgaattaaacaaagaaagtttcaaagcagat
caagaccttgaaccaaagttgacaaatattattattcaacaactggaagatgcttcagga
gatgtttctggcttagctgtgaaatgcttggctccgcttgtcaagaaggttagcgaggat
agagtggtggagatgacaaacaagctttgtgataaattactcaatggaaaggagcagcat
cgtgatactgctagtataggtctgaagacaatcattgtggaagttactacgccatcactt
gctgaaaagattttagtttctcttgccccacagctgatcagtggtgtcaccagtgggaag
agtgctgaaattaaatgtgaatgtctcgacatattaagtgatgtacttaatagatttggg
aatgtgattgcaaaagatcatgcatatatgctcactgcacttttatcccagctgagctcc
actcaagcaagcgtcncaaaaaagtctgtttcgtgcattgcatcgcttgctccatgtttg
tcggatgatctattagccaaggcaactttggaggttgtcaaattactgaaaaatagaagt
gcaaagtctgaaataactcgaacaaatatccagatgataggtgctctaagtcgctcagtt
ggataccggtttggaccacaccttgctgaagctgttcctttactcattaactactgcaca
actgcgtcagaaaatgatgaagagctccgcgaatacagcttgcaggccctcgagagtttt
atgctcaggtgtccaagagatatatccccatattgtgagggtattttgaatcttgctttg
gaatatgtgagctacgatcctaatttcactgatagcatggaggaggacactgatgatgaa
gtgcaggatgaggaagatgatgatgagagtgctgatgaatacacagacgatgaggatgca
agctggaaggttcgtcgggcatcagcgaagtgcctttctgcaattatagtatctcgtcct
caaacattgtccaagatgtatcaggaggcttgtccaaagttaattgaccgcttccgggaa
agagaggagaatgtaaagatggacatcttcaacacgtttattgagttgttgcgccaaact
gctaatgtgacgaaaggtcaaggagacattgatgagtctagccctagatggctgctgaag
caagaagtacccaaaattgtcaagtctatcaatagacagttgcgtgaaaaatcaatcaag
acaaaggttggagcattctcagtattgaaggagcttgttattgtattaccagattgtctt
gctgatcattttgggtctcttgttcctgggattgagaaggctttgaatgataaatcttct
acctccaacctgaaaatagaagcccttgcgtttacaaggatcgttatggcttcacattca
ccctctgtatttcatccgtacatccaggcactttccagtccaatattatcttctattgga
gatagatattacaaagtcactgctgaggctttacgggtgtgcggagagctagtccgtgtc
ctccgtccaaactttgaggcacattctatagatttcagaccatatattggtccgatctat
aaagctatattggcccgcttggcaaatcaagatcaagatcaggaagttaaagagtgtgcc
atatcttgcatgagccttgtgatctccacttttggtgatggtctccaaagggaattacca
tcatgccttcccatactcgttgataggatgggcaatgaaataacacgacttactgcagtc
aaggcatttgcggtgattgcgagttcacctcttcggatcgatcttaaatgtgttctggac
catgttgtttctgagctcacagctttccttcggaaggctaacagagctctcaggcaggca
acattgggaaccctgaattctctggttgtaacttatggaggccaaattggctcgtcgtct
tatgaaacgataatcgctgaactttctactctcataagtgacatcgatttgcacatggct
gctcttgcattggaactgtgtagcacaattatggttgacagacgatccattcaaaatgtc
ggtttagctgtgagacagaaggttttgcctcaggccctaattttgatcaggagtgctctt
ttgcaaggtcaagcactgcaggcactacaaaagttttttgcttcactggtccaatctgca
aacacaagctttgaaactttgttggactcccttatttccaccgccaagccatcacagtca
ggcggtctttccaagcaggccctatcctctattgcacagtgtgttgctgtgctatgctta
gcagctggtgatcagaagtgtgcatcaactattgaaatgcttaaaggcattctaaaggat
gacagctctgctaattctgctaaacaacacatggctttgttatgtttgggagaaattgga
agaaggaaggatctcagcaaacatgttcaaattgagaatattgtcattgaatcattccag
tcaccttttgaggagataaagtctgcagcatcttatgcccttggaaacattgctgttggc
aatctgtcaaagtatttgccatttatcttggatcagattgacaatcaacagaagaagcag
tatctcttgcttcattcattgaaagaggtaattgcacgtcagtctgttgatcatactggc
cagagtgagctccaggactcaaacattgtgaagatattggcattgctctttaatcactgt
gaaagtgaggaggaaggagtcaggaatgtggttgctgagtgtttaggcaaaattgcactt
attgaacctaatagattgatccctgctctaaaggaacgcacgtctagcccagcagcaaac
acaagggctacagttgcaattgctataaaatattcaattgttgaacggcctgggaaaata
gatccaatcatgtactctgagatttctactttccttatgttgattaaagatagtgacagg
catgtgagacgtgcagccgtcctggcattgagtacagccgcgcacaataagccaaatttg
atcaaagctcttcttcctgaattattacctcttttgtatgaccagactgtagtgaagcct
gaattgatcaggacagttgatctagggcctttcaagcatgtcgttgatgatgggcttgaa
cttaggaaagctgccttcgaatgtgtggacacattgctggacaattgtctggatcaagtg
aatccgtcatccttcattgttccattcctcttatctggcttaggcgatcattatgatgta
aaaatgccttgccatctgattctctcaaagctagcagacaagtgcccatctgctgttctt
gcagttctggactcattagttgaacctattgagaaaactatcagtcacaaacccaagggg
gatgcagtgaagcaggagattgatcgcaatgaggacatgattcgcagtgcccttcgagca
attgctgctctaagccgcataagtggcagcgattacagcatgaagttgaagaatctgatg
aacaagataacggccactccttcacttgccgagaagtacaactcggtgcgcagcgaatga
DBGET
integrated database retrieval system
