KEGG   Lolium rigidum (rigid ryegrass): 124654517
Entry
124654517         CDS       T09103                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03030  DNA replication
lrd03410  Base excision repair
lrd03420  Nucleotide excision repair
lrd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124654517
   03410 Base excision repair
    124654517
   03420 Nucleotide excision repair
    124654517
   03430 Mismatch repair
    124654517
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lrd03032]
    124654517
   03036 Chromosome and associated proteins [BR:lrd03036]
    124654517
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124654517
DNA replication proteins [BR:lrd03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124654517
  DNA Replication Termination Factors
   ELG1-RFC complex
    124654517
Chromosome and associated proteins [BR:lrd03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124654517
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124654517
  Check point factors
   HRAD17(Rad24)-RFC complex
    124654517
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_lid_RFC1 Rad17 AAA_22 RuvB_N Mg_chelatase AAA_assoc_2 SLFN-g3_helicase AAA_5 AAA_14 AAA_11 AAA_16 ResIII PhoH AAA_24 nSTAND3 DNAX_ATPase_lid Cdc6_lid AAA_2 AAA_19 AAA_25 AAA_30 AAA_7 AAA_28 AAA_23 RNA_helicase NB-ARC
Other DBs
NCBI-GeneID: 124654517
NCBI-ProteinID: XP_047049474
LinkDB
Position
5:140794472..140798390
AA seq 339 aa
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAFQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKAGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMTN
RILHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISSNDLISVSGAIP
EDIVKSLLAACKSGEFDVANKEVSNIIADGYPVSQLLSQFLDVIVNADDIPDEQKARICK
KLGEADKCLVDGADEYLQLLDMASETIRALLNIPQGLVF
NT seq 1020 nt   +upstreamnt  +downstreamnt
atggcgccgctcgtgccgtcgtcgcagccatgggtggagaaataccggccgaggcaagtg
aaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacaccctccagaccgcc
gacctaccacacatgctgttctacggcccgcctgggacggggaagaccaccactgcgctc
gccatcgccttccagctctacggtccagagctctacaagtcaagagttttggaacttaat
gctagtgatgaacggggaattaatgtggtgaggacgaagataaaagattttgctgctgtg
gctgttggttctgcacggaaagctggttatccctgcccaccatacaagattattatacta
gatgaagcagattcaatgacagaagatgcccagaatgcgttgaggcgtactatggagact
tattccaaagtgacaagattctttttcatatgcaattatatcagcaggataatagagcca
ctggcatcaagatgtgcaaagtttaggttcaagcctctatcagaagatgtgatgaccaac
cgcatcttgcatatatgcaatgaagaagggctcactctggatgctcaggcattgtccaca
ttaagtgccatctctcaaggagatcttcgtcgtgctataacttaccttcagagtgcagct
cgcttattcggatcttctatttcttccaacgacttgattagtgtttcaggggctatccct
gaagatattgtcaagtcattgctagcagcatgcaaatctggtgaatttgatgtggcaaac
aaggaagttagcaacattattgcagatggatatccagtttcccagctgctctcacagttt
ctagatgtgattgtcaatgcggatgatattccagatgagcagaaggcaagaatatgtaaa
aagcttggggaagcggataagtgcttggtcgatggggcagatgagtacttacagcttctg
gatatggctagcgagacaatccgtgctcttcttaacatcccccaaggtctggtcttctaa

DBGET integrated database retrieval system