Lolium rigidum (rigid ryegrass): 124654517
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Entry
124654517 CDS
T09103
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03030
DNA replication
lrd03410
Base excision repair
lrd03420
Nucleotide excision repair
lrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124654517
03410 Base excision repair
124654517
03420 Nucleotide excision repair
124654517
03430 Mismatch repair
124654517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124654517
03036 Chromosome and associated proteins [BR:
lrd03036
]
124654517
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124654517
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124654517
DNA Replication Termination Factors
ELG1-RFC complex
124654517
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124654517
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124654517
Check point factors
HRAD17(Rad24)-RFC complex
124654517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
Rad17
AAA_22
RuvB_N
Mg_chelatase
AAA_assoc_2
SLFN-g3_helicase
AAA_5
AAA_14
AAA_11
AAA_16
ResIII
PhoH
AAA_24
nSTAND3
DNAX_ATPase_lid
Cdc6_lid
AAA_2
AAA_19
AAA_25
AAA_30
AAA_7
AAA_28
AAA_23
RNA_helicase
NB-ARC
Motif
Other DBs
NCBI-GeneID:
124654517
NCBI-ProteinID:
XP_047049474
LinkDB
All DBs
Position
5:140794472..140798390
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAFQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKAGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMTN
RILHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISSNDLISVSGAIP
EDIVKSLLAACKSGEFDVANKEVSNIIADGYPVSQLLSQFLDVIVNADDIPDEQKARICK
KLGEADKCLVDGADEYLQLLDMASETIRALLNIPQGLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgtcgtcgcagccatgggtggagaaataccggccgaggcaagtg
aaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacaccctccagaccgcc
gacctaccacacatgctgttctacggcccgcctgggacggggaagaccaccactgcgctc
gccatcgccttccagctctacggtccagagctctacaagtcaagagttttggaacttaat
gctagtgatgaacggggaattaatgtggtgaggacgaagataaaagattttgctgctgtg
gctgttggttctgcacggaaagctggttatccctgcccaccatacaagattattatacta
gatgaagcagattcaatgacagaagatgcccagaatgcgttgaggcgtactatggagact
tattccaaagtgacaagattctttttcatatgcaattatatcagcaggataatagagcca
ctggcatcaagatgtgcaaagtttaggttcaagcctctatcagaagatgtgatgaccaac
cgcatcttgcatatatgcaatgaagaagggctcactctggatgctcaggcattgtccaca
ttaagtgccatctctcaaggagatcttcgtcgtgctataacttaccttcagagtgcagct
cgcttattcggatcttctatttcttccaacgacttgattagtgtttcaggggctatccct
gaagatattgtcaagtcattgctagcagcatgcaaatctggtgaatttgatgtggcaaac
aaggaagttagcaacattattgcagatggatatccagtttcccagctgctctcacagttt
ctagatgtgattgtcaatgcggatgatattccagatgagcagaaggcaagaatatgtaaa
aagcttggggaagcggataagtgcttggtcgatggggcagatgagtacttacagcttctg
gatatggctagcgagacaatccgtgctcttcttaacatcccccaaggtctggtcttctaa
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