Lolium rigidum (rigid ryegrass): 124654575
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Entry
124654575 CDS
T09103
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124654575
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124654575
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124654575
03036 Chromosome and associated proteins [BR:
lrd03036
]
124654575
Peptidases and inhibitors [BR:
lrd01002
]
Metallo peptidases
Family M1
124654575
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124654575
Coactivators
SAGA/TFTC/STAGA complex
124654575
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
124654575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
DDHD
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
124654575
NCBI-ProteinID:
XP_047049528
LinkDB
All DBs
Position
5:complement(192980824..192995826)
Genome browser
AA seq
1453 aa
AA seq
DB search
MAKARKQKPEGGAGGGGATVLHQKLCLSIDMEKQLIYGYTEIKVLLAENDTFALHADSMT
IRNILVDGEAAEFEYSPHWKNVDGQPSWLSVSCPKTAADAACSAYISSLYGESVPNLIIS
SERSVKSTTELPERENGEHHEENGGNSVKFSDDKAVKICNGSAEGNDKEEEKENKEEDEK
ENEKEEKTEMETEEKEREKDKDKETEEGKEKETQKEKEKEREENEEKEKKDISENEKGKE
NEMHIENEKVKNTKLVRVDYILEKAETGVHFVNNVLHSNSQIRRAHCWFPCIDSATQRCP
FDLEFTVSTDLVAVSNGDLLYQVLSKEDPPRKTYVYKLNTPVSAQWISLVVGPFEVLPDK
NGTSVSHMCLSPTLSKLENTISFFHDAYSCYEDYLAAPFPFGLYKQIFLPSEMVVSPMSF
GASTCIFSADILNDEKVIDQIIGTRIKLAYALARQWFGVYTSAEEPNDEWLLDGLAGFLT
DLFIKRYLGNNEARYRRFKANCTVCQFDVSGATGLGSPAASTDLYGTQTFGSYGKIRSLK
AVAVLQTLEKQMGPDFFRKILQMIVASTRASRTLSTKEFRHLANKIGNLERPFLKEFFPR
WIESCGCPIMRLGISYSKRRNMVELAVSRGCTAKAEPGSDSHTDGDIQEGATGWPGMMSV
RVHETDGVYDHPILPLAGEALQVVELQCHSKVAAKRFQKTKKGSKPDGSDDNVDASTQEN
RMRSILPNSLFFYSCYLPETYFGSMYCSMDAPLLWIRVDPEMEYLAEIHFHQPIQMWINQ
LEKDKDVISQSQAIAVLEKLPQLSFAVINALNNFLNDTKAFWRVRVEAAYALAVTASEDT
DLAGLLHLVKFYKSRRFDADIGLPRPNDFHDIPEYFVLEAIPHAVALVRSSDKSSPRQAI
EFILQLLKYNDNNGNVYSDAYWLAAMVQAIGEVEFGQQGIGLLSSLLKRIDRLLQFDNFM
PGYNGVLTVSCIRALARIAERVSSSICLERICELISPFRNMDKPWKVRIEASRVLLDLEL
HHKGVDASLLLFLKYADEEKSLRGGTKLAVHVLRICQANIESNLTDQIKLPTLVGLLHLL
GSKKSYNNVLLRHNVFCILQIAAGRPPTLYGVPKFSAPSPLVQEISIDQHTKADSSVPQL
SRPQEPSTSTPSVREVLPTTGPSKEADNISNCSERRNVVKIRVRRAASSSKADGAASSVS
KADGADNKVHSHGGRNENEVGPCSSMSVDAPMVGAPNEPLNTSNHIEEQNSCHDRESRMS
ASVSNAKQMDTHEVSKELQCTADSRLDGADSRLDAVKDQFSPAINVQESVDKPSSQLEGV
STSYVGTQAPESVNGLDSKEKKRKDKKDKKRNRDEKRDKKDDPEYLEKKRLKKEKKKMEK
ELARKQKEGARLSSQQEIVKPSYSQGTLAATPPAPEQSAEPQVSNKDAAAVDIARTPPTK
KIKIRFKPLKKIN
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgcggaagcagaagccggaagggggcgccggcggaggaggcgccaccgtg
ctccaccagaagctctgcctctccatcgacatggagaagcagctgatctacgggtacacc
gagataaaagttcttctagctgagaacgatactttcgctctacatgctgacagtatgaca
attcggaacatattggtggatggtgaggctgctgagtttgagtattctcctcactggaaa
aatgttgacggtcaaccgagttggttatcagtatcatgtccgaagactgcagctgatgct
gcgtgctcagcttacatttcttctctatatggcgaatctgtacctaatctcatcatttca
tctgagagatcagtcaagtcaaccactgagttacccgaaagagaaaatggtgaacatcat
gaagaaaatggtggaaactctgttaaattttctgatgacaaagcagttaaaatctgcaat
ggttctgcagagggaaatgacaaggaagaggaaaaggaaaacaaagaggaagatgaaaag
gagaacgaaaaggaagagaaaactgagatggagacagaggagaaagagagggagaaggac
aaggacaaggaaactgaagaggggaaggagaaggagacacagaaggagaaggaaaaggag
agggaggagaatgaggaaaaagaaaagaaagacataagtgaaaatgagaagggcaaggaa
aatgaaatgcatatcgagaatgagaaggtgaagaacacaaaactggttcgtgtagattat
attttggagaaggctgaaaccggcgtccattttgtcaacaatgttctacatagtaatagt
caaataagacgtgcacactgctggttcccttgcattgatagtgccacacaacgttgtcca
tttgacctagagtttacagttagcacagatctagtcgcagtcagcaatggcgacttgctt
taccaggtcttaagcaaggaagatcctccaaggaaaacttatgtatataagttgaacact
cctgttagtgcacagtggatatcattggttgttggtccatttgaagttcttcctgacaag
aatggaacaagtgtatcacacatgtgtttatctccgactttgtctaagcttgagaacacc
atatcatttttccacgatgcttacagctgttacgaagattatcttgctgcaccatttccc
tttggtttatacaagcaaatttttcttccatctgaaatggttgtatcaccaatgagcttt
ggagcctccacatgcatcttcagtgcagatatcttaaatgatgagaaagttatagatcag
attattggcacgagaatcaaactagcatacgcccttgcaaggcagtggttcggcgtatac
acaagtgcagaagagccaaatgatgaatggctactggatggtttggctggttttcttacg
gacctttttatcaagcgttaccttgggaataatgaggcacgctataggcgtttcaaggcc
aactgcaccgtatgtcagtttgatgtcagtggtgcaactggcttggggtctcctgctgct
tcaactgatctgtatggaactcaaacgtttggctcgtatgggaaaatccgttcattgaag
gcagtagctgttcttcaaacattggagaagcagatgggaccagatttttttcggaagatt
ctgcagatgatagtggcttcaactcgtgcttcaagaacactaagtacgaaagagtttagg
caccttgcgaataagattggtaatctggaacgtccattcctgaaagaatttttcccacgg
tggattgaatcttgtggatgtccaattatgagattgggaatctcctatagcaaaaggaga
aatatggttgaattagctgtttcacggggttgcacagcaaaagctgagcctggttctgat
agtcacacggatggagatattcaagaaggtgctactggatggcctggaatgatgagcgtg
cgtgttcatgaaactgacggagtgtatgatcatccaattctaccattggctggtgaagct
ttgcaggtggtggaattacagtgccattccaaagtagcagcaaagcggtttcagaaaacc
aaaaagggctccaaacctgatggttctgatgacaacgtagatgcttcgactcaagagaac
cgcatgaggtctattttgcctaattcactttttttttattcctgctatttgcctgaaact
tattttggatctatgtactgcagcatggatgcacctttactatggatcagagtggaccca
gaaatggaataccttgctgaaatccattttcaccagcctattcagatgtggatcaatcag
ttggagaaggacaaagatgtcatttcccagtcacaggcgatagctgttttggagaaatta
cctcagctctcttttgctgtgattaatgccctcaataatttcttaaatgatacaaaggcc
ttttggagagtcagagttgaagcggcatatgcattagctgtaactgcgtctgaggacacc
gacttagctgggctgcttcatctggttaaattctataaaagccgccggttcgatgcagat
attggattacccaggccaaacgacttccatgatattccagaatactttgttcttgaggca
attccccacgcagtagctcttgtgagatcatcagataagagtagcccgagacaagctatt
gagtttattcttcagcttctaaagtacaatgataacaacggaaatgtatactctgatgcc
tactggctagctgcaatggtccaggcaataggtgaagtagaatttggccagcagggtata
ggcctgctatcctctcttctgaagcgtatcgaccgactcctgcaattcgacaactttatg
cctggttacaatggggttttgactgtcagctgtattcgggcccttgcacgtatagcggag
agggtatcatcctccatttgccttgaacgtatttgtgaattgatctcccctttccgtaac
atggataaaccatggaaagtccgaatagaagctagcagggttcttcttgatctcgaactt
catcataaaggcgtagatgcatctctcttgttgttcttgaaatatgccgatgaagaaaaa
tctttgcgaggaggcacaaagttggctgttcatgtgttgcgcatatgtcaagcaaatatt
gaatctaacctcactgatcagataaaattaccaacactggttggtctccttcacttgctt
ggtagcaaaaaatcgtacaacaatgttctactccgccacaatgtattctgcattttgcaa
attgctgctggaaggcctccaacactgtatggagttccaaagttttccgccccttctcca
ctggtccaggagatatctatcgatcagcatactaaagctgattcctcagttcctcaacta
tctaggcctcaagaaccttccactagcactcctagtgttcgtgaggttttacctaccact
ggaccttccaaagaggctgacaatatatctaactgcagcgagagaaggaacgttgtcaaa
atcagggttaggcgtgctgcatcttccagtaaagcagatggtgctgcatcttccgtgagt
aaagcagatggtgctgataacaaagttcattcacatggtggaagaaacgaaaacgaagta
ggtccttgtagttcaatgtcggtggatgcccccatggttggagcgccaaatgagccactg
aacacaagtaatcatatcgaggagcagaactcatgtcatgaccgtgaatcaaggatgtct
gcgagcgtcagcaatgccaaacagatggacacacatgaggtttccaaggaactacagtgt
acagccgactcaaggctagatggtgctgattcaaggctagatgctgttaaggatcagttc
tctcctgccattaatgtgcaggaaagcgtagataagccgagcagtcagcttgaaggagtg
tccaccagctatgttggaacccaagctccagaatctgtcaacgggctggactctaaggag
aagaagagaaaggacaagaaagataagaagcggaaccgagacgaaaaacgagacaagaaa
gatgacccggagtatctggagaaaaagcgactcaagaaagagaagaaaaagatggagaag
gagttggccagaaagcagaaggaaggcgcccgtctttcttctcagcaagaaatagtgaaa
ccttcgtactcgcagggtactttggcagcgacaccaccagctccggagcaaagcgctgaa
ccccaggtttcaaacaaggatgctgctgctgtagatattgcaaggacaccaccgaccaag
aaaataaagatcagattcaagcccttgaagaagataaactga
DBGET
integrated database retrieval system
