Lolium rigidum (rigid ryegrass): 124654859
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Entry
124654859 CDS
T09103
Name
(RefSeq) pre-mRNA-splicing factor SLU7
KO
K12819
pre-mRNA-processing factor SLU7
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124654859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124654859
Spliceosome [BR:
lrd03041
]
Complex C
Other components
Step II factors
124654859
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
124654859
NCBI-ProteinID:
XP_047049799
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Position
1:complement(214828300..214831674)
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AA seq
535 aa
AA seq
DB search
MATASVSFKSREDHRKQLELEEARKAGLAPAELDEDGNEINPHIPQYMSSAPWYLNAEKP
SLKHQRKWKSDPNYTKAWYDRGARLYQANKYRKGACQNCGAMTHDKKSCMERPRNVGAKW
TNMDIAPDEKVESFELDYDGKRDRWNGYDTSTYSRVILDYEAREEARKKFLKEQQLKKLE
EKDGEQDGENAGSEEDEEDGLKIDEAKVDESAQMDFAKVEKRVRTTGGGSTGTVRNLRIR
EDTAKYLLNLDVNSAYYDPKTRSMREDPLPDADPNDKFYVGDNQNRQSGQALEFKQLNVH
AWEAFDKGQDFHMQAAPSQAELLFKSFLVKKEKLKSEGKDKIMEKYGNAASEEPIPRELL
LGQSEKEIEYDRTGRIIKGQDIALPKSKYEEDVLINNHTTVWGSWWKDHQWGYKCCKQTI
KNSYCTGLAGIEAAEASADLMKANMARKEAAEEEPARQEEKKLATWGTDIPQDLVLDQKL
LQESLKKEATRKKEEMDERKRKYNVKWNDQVTAEDMEAYRMTRVRHDDPMRDFLN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcttcagtatctttcaagtctcgtgaggaccacaggaagcagctcgagctc
gaggaggcgcgtaaggcggggctagcccctgccgaactcgacgaggatgggaacgagatt
aaccctcacatcccgcagtacatgtcctcggccccatggtaccttaacgccgagaagccg
agtttgaagcatcagaggaaatggaagtcggacccgaactacaccaaggcgtggtacgat
aggggtgccaggctttaccaagcaaacaaatacaggaaaggcgcttgccaaaactgtgga
gccatgactcatgacaagaagtcgtgcatggagcggcctcggaatgttggagctaaatgg
actaacatggatatagctccagatgagaaagtggagtcgtttgaacttgattacgatggc
aagcgtgatcgctggaacggttacgatacgtcgacctacagtcgtgttatcctagattat
gaagctagagaagaggccaggaagaagttcctgaaggaacaacagctcaagaaacttgag
gagaaggacggtgagcaggatggtgagaatgcgggcagcgaagaggatgaagaggatggc
ctcaagatagatgaggccaaagttgacgagagtgctcaaatggatttcgctaaggtggaa
aagcgtgtgcgcacaacaggcggtggaagcactggaactgtgaggaatttgcgtattaga
gaagacactgcaaagtatcttctcaatctcgatgtcaactctgcgtattatgatccaaaa
acccgttccatgcgtgaggatcctttgccagatgcagaccccaacgataaattctatgtg
ggtgataaccaaaatagacaaagtggacaagctctggagttcaaacaactcaatgtccat
gcgtgggaagcttttgacaaggggcaggatttccatatgcaagcagccccatctcaagct
gaactacttttcaagagtttcttggtcaagaaggagaagctgaaatctgaaggcaaggac
aaaattatggagaagtatgggaatgctgcatctgaagaaccaatccctcgcgagcttctt
cttgggcaaagtgagaaagagattgagtacgaccggactggccgcataattaagggacag
gatatagctcttcctaagagcaaatacgaagaggatgtgttaattaataaccacacaaca
gtgtggggttcatggtggaaagatcatcaatggggctataaatgctgtaagcagactatc
aaaaatagttactgcacaggattggctggaattgaggctgctgaagcatcagctgatttg
atgaaggcaaacatggcacgcaaggaggctgctgaagaggaacctgcacgacaagaagaa
aagaaactagccacttggggaacagatattcctcaggatcttgttctcgaccagaagttg
cttcaggaatccctaaagaaggaggccacaaggaagaaggaagagatggacgagagaaag
aggaagtacaacgtgaagtggaatgaccaggtcactgcggaagatatggaggcctaccgt
atgacgagggtccgccacgatgatcctatgagagattttctcaattag
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