Lolium rigidum (rigid ryegrass): 124654866
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Entry
124654866 CDS
T09103
Name
(RefSeq) DNA topoisomerase 6 subunit B-like
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124654866
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
124654866
DNA replication proteins [BR:
lrd03032
]
Prokaryotic type
DNA Topoisomerases
124654866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124654866
NCBI-ProteinID:
XP_047049802
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All DBs
Position
5:160269541..160276710
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AA seq
690 aa
AA seq
DB search
MDDAGDGGASAGGSKKKPSAAAAKGKATGKGKAASKGSPKAKESSLLKQKSPAEFFAENK
NIAGFDNPGKSLYTTMRELVENALDSAESISELPDIEITIEEITRSKFNTMIGLVDRERV
DAALYDDFESAKAREKRLAKEARFQETQAKNAALGKKVKDAPAARGKGRGEASFFRVTCK
DNGRGMSHEDIPNMFGRVLSGTKYGLRQTRGKFGLGAKMALIWSKMSTGLPIDIKSSMKD
QNYISFCRLDIDIHKNVPHIHLHEKHENNDHWHGAEIQVIIEGNWTTHRSRILHYMRQMA
VITPYAQFLFRFLSDTAEKNLKIKFARRTDVMPPVPLLTKHHPSAVDLLLIKRLITDTTK
LNLLQFLQHDFVNISKAHADRLIGEMGPDFSAKTTVNSLTSQQLVRIHQLFRQAKFDDPS
GDCLSPAGEYNLRLGIIKELHPDLVATHASSPQVFEGHPFIVEAGISIGGKDVKQGLNIF
RFANRIPLLFEQGADVITRTAQKRINWGLYKINQQQDKIGVFVSIVSTKIPFKGTGKEYI
GDDITEIADAVKSALKQCCLQLKSKIVKKLQAREQQDRKRNLNKYIPDVARTIMETLGEI
ADESPPKRPRYDKEDEELLEKINSEEVTEMTFRDCLTQHVEQVDYEMALEYAMQSGVSNE
PREALYLNSLEGSYKFMDLKSPTFLFRFIP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgccggcgacggcggggctagcgccggcggcagtaagaagaagccctctgcg
gcggccgccaaggggaaggcgacgggaaaagggaaggccgcctccaaggggtcgcccaag
gccaaggagagcagcctcctcaagcagaaatcgccagctgagttcttcgcggaaaacaaa
aacatcgctgggtttgacaatcctggaaaatctctgtacaccacgatgcgggagctagtt
gagaatgcccttgattcggccgagtccatctccgagctccccgatatagaaattacgata
gaagagatcaccaggagcaaattcaacacaatgatcggactggttgatcgagagcgtgtt
gatgcagcactctatgatgattttgaatcagctaaggctcgtgagaaacgcctagccaaa
gaagcacgtttccaagaaacacaagctaaaaatgctgctcttgggaagaaagttaaggac
gctccagctgctcgcggaaaaggtcggggtgaggcttcgtttttcagagtgacttgcaag
gataatggccgaggcatgtcacatgaagatatcccaaacatgtttggcagagtgctatcg
ggcacgaagtatggtttgaggcaaacacgcggaaaatttggacttggtgctaaaatggca
cttatatggtcaaagatgagtacgggtcttcctattgatattaagtcatcgatgaaagac
caaaattacatttcgttctgtcgacttgacatagacattcacaaaaatgtccctcatatt
catttacatgagaaacatgagaacaatgatcactggcatggggcagagattcaagttatt
attgagggaaattggacaactcatcgttcaaggatactacattacatgcgacagatggct
gtcatcactccatatgctcaattcctatttagatttctctctgatacagcagaaaaaaat
ttgaagataaaatttgcacgaaggacagatgtgatgcctcccgttccactcctaacaaag
catcacccatctgctgtggatttgctgctgataaagcgcttaattactgataccactaag
ctgaaccttttgcagttcctgcaacatgactttgtgaatataagcaaagcacatgctgac
cgtttaatcggggagatggggcctgattttagtgcaaaaacgacagtcaacagccttaca
tcacaacaattagtgcggatacatcagttatttcggcaggctaagtttgatgatcccagt
ggcgattgtcttagtcctgcaggtgaatacaatttacgtctaggtatcataaaagagcta
caccccgatctggttgcaacacatgcaagcagccctcaggtttttgaagggcatccattt
attgttgaagctggaataagcattggtggaaaagatgttaaacaaggtttaaatattttt
aggtttgcaaaccgcataccgcttctttttgaacaaggtgcggacgtcatcacaagaact
gctcaaaaaaggataaattggggcttgtacaaaattaatcagcagcaggacaagattggt
gtctttgtgagcattgtcagtacaaagataccttttaaaggtacaggaaaagaatatatt
ggagatgatataaccgagatagcagatgctgtaaagtcagcccttaagcagtgctgtctc
caactgaagtcaaagatagtgaagaaacttcaggctcgtgaacagcaggacaggaaaaga
aacctgaacaaatacattcctgacgtggcaaggacaattatggaaacactgggggaaatc
gcagacgagtctccccccaagaggccacggtatgacaaggaagacgaggaactccttgag
aagataaattcggaggaggtgacagagatgacttttagagattgcttaactcagcacgtt
gaacaggttgactatgagatggcactggagtacgccatgcagagcggcgtaagcaacgag
cctcgggaagcactctatctgaactcgctggaagggtcttacaagttcatggacctcaag
agccctactttcttgtttcggttcatcccatga
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