Lolium rigidum (rigid ryegrass): 124654963
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Entry
124654963 CDS
T09103
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124654963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124654963
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
124654963
Prokaryotic type
Archaeal type
TFB
124654963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Zn_ribbon_3
DUF7573
RB_B
zinc_ribbon_6
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-GeneID:
124654963
NCBI-ProteinID:
XP_047049893
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All DBs
Position
5:complement(247022818..247026019)
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AA seq
312 aa
AA seq
DB search
MSDIFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESNDNDPVRVG
GPSNPLLTDGGLSTVIAKPNGAHGDFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG
LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK
KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNTAVKAAQEAVQRSEEL
DIRRSPISIAAAVIYMITQLSEDKKPLKDISLATGVAEGTIRNSYKDLYPYAARLIPNSY
AKEEDLKNLCTP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcttctgcccggactgcaagaagcacacggaggtggcgttcgaccactcg
gcgggggacacggtgtgcacggagtgcggcctcgtcctcgaggcgcactccgtcgacgag
acctccgagtggcgcaccttcgccaacgagtccaacgacaacgaccccgtccgcgtcggc
gggccctccaacccgctgctcaccgacggggggctctccaccgtcatcgccaagcccaac
ggcgcccacggcgacttcctctcctcctccctcggccgctggcagaacagggggtccaac
cccgaccgctccctcatcctcgccttccgcaccatcgccaacatggcagacaggttgggt
cttgtggctactattaaggaccgagccaacgaaatctataagaaggtggaagatctcaag
tctatcaggggaagaaatcaagatgccatattagctgcttgtctttatattgcttgcaga
caagaagatcgtcctaggactgtaaaagaaatatgttccgttgccaatggagctacaaag
aaagagattggccgagcaaaagaattcattgtaaagcaactggaagttgagatgggccaa
tctatggagatgggaaccatccatgctggagatttcctgaggcgtttctgttcaactctt
gggatgaacaacactgctgtgaaagcagctcaggaggcagttcagcgctcagaggagctt
gatatcaggaggagtcctatttcaattgcggctgctgtcatttatatgataacccagctc
tcagaggacaagaagccacttaaagatatctccctggctactggtgtggcagaaggcacc
atcaggaattcatacaaggacctgtatccatacgctgcgaggctcatcccgaactcctac
gccaaggaggaagacctaaagaacctctgcacaccgtag
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