Lolium rigidum (rigid ryegrass): 124655113
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Entry
124655113 CDS
T09103
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124655113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124655113
03036 Chromosome and associated proteins [BR:
lrd03036
]
124655113
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
124655113
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
124655113
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
NBCH_WD40
Ge1_WD40
WD40_MABP1-WDR62_1st
eIF2A
RMC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
Pep3_Vps18
Beta-prop_VPS8
CFAP43_N
WDR54
YajC
Motif
Other DBs
NCBI-GeneID:
124655113
NCBI-ProteinID:
XP_047050026
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All DBs
Position
5:complement(171469333..171473671)
Genome browser
AA seq
476 aa
AA seq
DB search
MEAAGCSSSRPPRRRRPEILPPAPGSAGPSRPYMPSLCTNSKNPSTKCYGDRFIPDRSAM
DMDMAYYLLTEPKKDQENESMVPPAKQAYRRLLAEKFLGGRTRILAFRNKPPEPQGMLQQ
ISAETQTSSQINPAKQHRKIPKFAERTLDAPGVVDDYYLNVLDWGSKNVVSIALENTLYL
WNSSDSSTSELVTVDDDNGPITSVSWSCEGQHIAIGLNSSDIQLWDASSSRKLRTLQGVH
ESRVGSLAWNSNILTTGGMDGKIVNNDVRMRSHIVQTYRGHEAEVCGLRWSGSCQQLASG
GNDNLVHIWDASMASSNPSLGHTRWLHRFNDHLSAVKALAWCPFQSNLLASGGGGNDRCI
KFWNTHTGLCLNSVDTGAQVCALIWNKNEKELLSACGFIQKPLILWKYPSMVKLAELEGH
TSRVLCLAQSPDGSTVASVAADETLRFWNVFGTSEALKPAAKTVRTGMFNSFSHIR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgggctgcagctcgtcccggccgccgagacgccgccggccggagattctt
ccgcctgcgcctggatccgccggcccgagtaggccgtacatgccgtccctctgcaccaac
tccaagaacccgtccaccaagtgctacggtgacagattcataccagatagatcagcaatg
gacatggacatggcatattacctccttacggaacctaagaaggaccaggaaaatgaaagc
atggtaccaccagctaaacaagcatacaggaggcttctagctgagaaattcctgggcggc
agaaccaggattcttgccttcaggaacaagccaccagagcctcaagggatgctgcagcag
atttcagccgaaactcagacttccagtcagatcaatcctgctaaacagcaccgaaagatt
ccaaagtttgctgagaggacgctagatgcccctggagtggttgatgattactatcttaac
gtgttggattggggaagcaaaaatgtggtgtccattgcccttgagaataccttgtacttg
tggaattcatctgatagctcaacttctgagcttgtgactgttgacgatgacaatggtccc
atcactagtgtcagctggtcctgtgagggacaacatattgccattggcctaaactcttct
gacatccagctctgggacgcgagctctagtcgcaagctgagaacactccaaggtgtccat
gaatcaagggttggttcgctggcatggaacagtaacatcctgacaaccggtggaatggat
ggcaagatcgtgaacaacgatgtcaggatgagatctcatattgttcagacataccgaggg
catgaagctgaggtgtgcgggttgagatggtcaggatcttgtcagcaattggcaagtggt
ggaaacgacaacctagtgcacatatgggatgcatcgatggcatcttctaatccatcactg
ggtcatactagatggcttcacaggtttaatgaccacttgtctgcagtgaaagctcttgcc
tggtgtccatttcagagcaacttacttgcctctggtggtggtggaaatgatagatgcatc
aaattctggaacacgcacacaggtttatgtttgaattctgttgatactggagcccaagta
tgtgcactaatctggaataagaatgagaaagagctactgagtgcttgtggttttatacaa
aaaccactcattttatggaaatacccatcaatggttaaattggctgaacttgaaggtcac
acttctcgtgtcctctgcttggcacagagccctgatggcagcacggtagcctctgtcgca
gcagatgagactctaaggttctggaatgtatttggaacttctgaagcactgaaacctgca
gccaagactgtacgcactggaatgtttaatagtttcagccatatcagatga
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