Lolium rigidum (rigid ryegrass): 124655148
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Entry
124655148 CDS
T09103
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03030
DNA replication
lrd03410
Base excision repair
lrd03420
Nucleotide excision repair
lrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124655148
03410 Base excision repair
124655148
03420 Nucleotide excision repair
124655148
03430 Mismatch repair
124655148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124655148
03036 Chromosome and associated proteins [BR:
lrd03036
]
124655148
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124655148
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124655148
DNA Replication Termination Factors
ELG1-RFC complex
124655148
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124655148
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124655148
Check point factors
HRAD17(Rad24)-RFC complex
124655148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
RuvB_N
AAA_22
Mg_chelatase
AAA_5
AAA_14
AAA_assoc_2
AAA_16
AAA_11
ResIII
AAA_24
SLFN-g3_helicase
PhoH
AAA_2
nSTAND3
AAA_30
AAA_19
DNAX_ATPase_lid
Cdc6_lid
AAA_7
AAA_28
AAA_25
AAA_23
IstB_IS21
DUF3853
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
124655148
NCBI-ProteinID:
XP_047050055
LinkDB
All DBs
Position
5:complement(102235521..102239377)
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTNTLQTADLPHMLFYGPPGTGKTTTAL
AIAFQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGSARKAGYPCPPYKIIIL
DEADSVTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDVMTN
RILHICNEEGLTLDAQALSTLSAISQGDLRRAITYLQSAARLFGSSISSNDLISVSGAIP
EDIVKSLLAACKSGEFDVANKEVNNIIADGYPVSQLLSQFLDVIVNADDIPDEHKARICK
KLGEADKCLVDGADEYLQLLDMASETIRALLNIPQGLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgtcgtcgcagccatgggtggagaaataccggccgaggcaagtg
aaggacgtcgcgcaccaggaggaggtggtccgggtgctcaccaacaccctccagaccgcc
gacctaccacacatgctgttctacggcccgcctggcacggggaagaccaccactgctctc
gccatcgccttccagctctacggtccagagctctacaagtcaagagttttggaacttaat
gctagtgatgaacggggaattaatgtggtgaggacgaagataaaagattttgctgctgtg
gctgttggttctgcacggaaagctggttatccctgcccaccatacaagattattatacta
gatgaagcagattcagtgacagaagatgcccagaatgcgttgaggcgtactatggagact
tattccaaagtgacaagattctttttcatatgcaattatatcagcaggataatagagcca
ctggcatcaagatgtgcaaagtttaggttcaagcctctatcagaagatgtgatgaccaac
cgcatcttgcatatatgcaatgaagaagggctcactctggatgctcaggcattgtccaca
ttaagtgccatctctcaaggagatcttcgtcgtgctataacttaccttcagagtgcagct
cgcttatttgggtcttctatttcttccaacgacttgattagtgtttcaggggctatccct
gaagatattgtcaagtcattgctagcagcatgcaaatctggtgaatttgatgtggcaaac
aaggaagttaacaacattattgcagatggatatccagtttcccagctgctctcacagttt
ctagatgtgattgtcaatgcggatgatattccagatgagcacaaggcaagaatatgtaaa
aagctcggggaagctgataagtgcttggtcgatggggcagatgagtatttacagcttctg
gatatggctagcgagacaatccgtgctcttcttaatatcccccaaggtctggtcttctaa
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integrated database retrieval system
